FFCP PHASE1:Hg19::chr2:190440054..190440071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:190440054..190440071,- | |||
|description=CAGE_peak_at_chr2:190440054..190440071,- | |||
|id=chr2:190440054..190440071,- | |||
|ontology_enrichment_celltype=CL:0002139!3.39e-26!24;CL:0000115!2.72e-21!35;CL:0000071!5.89e-20!18;CL:0002546!5.89e-20!18;CL:0002078!6.65e-16!44;CL:1000413!1.45e-14!9;CL:0000213!3.57e-11!57;CL:0000215!3.57e-11!57;CL:0002274!1.78e-08!5;CL:0000457!1.78e-08!5;CL:0002191!1.78e-08!5;CL:0000097!1.78e-08!5;CL:0000831!1.78e-08!5;CL:0002028!1.78e-08!5;CL:0005020!8.75e-08!6;CL:0002138!8.75e-08!6;CL:0005022!8.75e-08!6;CL:0000222!1.05e-07!119;CL:0002544!1.47e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.63e-23;24!CL:1000413;1.08e-22;9!CL:0000071;4.50e-20;18!CL:0002544;1.31e-15;6!CL:0002545;2.59e-12;2!CL:0002078;3.57e-11;45!CL:0000115;7.27e-11;36!CL:0002144;8.31e-09;3!CL:0000213;1.68e-08;58!CL:0000215;1.68e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.47e-23,24;CL:1000413,9.35e-23,9;CL:0000071,4.08e-20,18;CL:0002546,4.08e-20,18;CL:0002544,1.13e-15,6;CL:0000115,1.49e-15,36;CL:0002078,1.74e-12,45;CL:0002545,2.59e-12,2;CL:0000213,1.00e-09,58;CL:0000215,1.00e-09,58;CL:0002144,8.31e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.50e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.89e-20!18;UBERON:0004638!5.89e-20!18;UBERON:0004852!5.89e-20!18;UBERON:0000055!1.25e-19!69;UBERON:0002049!3.17e-16!79;UBERON:0007798!3.17e-16!79;UBERON:0001981!5.85e-16!60;UBERON:0007500!5.85e-16!60;UBERON:0004537!5.85e-16!60;UBERON:0006965!5.85e-16!60;UBERON:0004872!6.58e-16!84;UBERON:0000487!9.10e-16!22;UBERON:0003915!1.45e-14!9;UBERON:0004700!1.45e-14!9;UBERON:0001917!1.45e-14!9;UBERON:0004535!7.40e-14!110;UBERON:0006914!1.64e-13!25;UBERON:0001009!2.81e-13!113;UBERON:0003914!3.24e-12!118;UBERON:0007023!9.72e-10!115;UBERON:0000477!1.57e-09!286;UBERON:0001637!2.90e-09!42;UBERON:0003509!2.90e-09!42;UBERON:0004572!2.90e-09!42;UBERON:0004111!1.99e-08!241;UBERON:0003081!4.07e-08!216;UBERON:0000490!6.74e-07!138;UBERON:0002465!7.48e-07!10;UBERON:0000025!9.30e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;1.08e-22;9!UBERON:0004700;1.08e-22;9!UBERON:0001917;1.08e-22;9!UBERON:0004638;4.50e-20;18!UBERON:0001986;4.50e-20;18!UBERON:0004852;4.50e-20;18!UBERON:0000487;1.63e-16;22!UBERON:0006914;1.38e-14;25!UBERON:0005800;2.59e-12;2!UBERON:0001515;2.59e-12;2!UBERON:0000490;9.44e-11;33!UBERON:0010523;8.31e-09;3!UBERON:0001915;8.31e-09;3!UBERON:0001982;8.31e-09;3!UBERON:0007500;1.08e-08;56!UBERON:0001981;1.08e-08;56!UBERON:0004537;1.08e-08;56!UBERON:0001637;7.72e-08;42!UBERON:0003509;7.72e-08;42!UBERON:0004572;7.72e-08;42!UBERON:0000055;2.76e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,9.35e-23,9;UBERON:0004700,9.35e-23,9;UBERON:0001917,9.35e-23,9;UBERON:0004638,4.08e-20,18;UBERON:0001986,4.08e-20,18;UBERON:0004852,4.08e-20,18;UBERON:0000487,1.51e-16,22;UBERON:0006914,1.28e-14,25;UBERON:0005800,2.59e-12,2;UBERON:0001515,2.59e-12,2;UBERON:0000055,1.07e-11,68;UBERON:0002049,3.40e-10,78;UBERON:0007798,3.40e-10,78;UBERON:0007500,1.49e-09,59;UBERON:0001981,1.49e-09,59;UBERON:0004537,1.49e-09,59;UBERON:0006965,1.49e-09,59;UBERON:0010523,8.31e-09,3;UBERON:0001915,8.31e-09,3;UBERON:0001982,8.31e-09,3;UBERON:0001637,8.50e-09,42;UBERON:0003509,8.50e-09,42;UBERON:0004572,8.50e-09,42;UBERON:0004535,2.83e-07,109;UBERON:0001009,4.47e-07,112;UBERON:0004872,8.08e-07,83;UBERON:0003914,8.69e-07,117 | |||
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| ||
|short_description=p@chr2:190440054..190440071,- | |||
}} | }} |
Latest revision as of 04:19, 29 July 2015
Short description: | p@chr2:190440054..190440071, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:190440054..190440071, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.47e-23 | 24 |
endothelial cell of artery | 9.35e-23 | 9 |
blood vessel endothelial cell | 4.08e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.08e-20 | 18 |
aortic endothelial cell | 1.13e-15 | 6 |
endothelial cell | 1.49e-15 | 36 |
meso-epithelial cell | 1.74e-12 | 45 |
thoracic aorta endothelial cell | 2.59e-12 | 2 |
lining cell | 1.00e-09 | 58 |
barrier cell | 1.00e-09 | 58 |
capillary endothelial cell | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 9.35e-23 | 9 |
arterial system endothelium | 9.35e-23 | 9 |
endothelium of artery | 9.35e-23 | 9 |
blood vessel endothelium | 4.08e-20 | 18 |
endothelium | 4.08e-20 | 18 |
cardiovascular system endothelium | 4.08e-20 | 18 |
simple squamous epithelium | 1.51e-16 | 22 |
squamous epithelium | 1.28e-14 | 25 |
segment of aorta | 2.59e-12 | 2 |
thoracic aorta | 2.59e-12 | 2 |
vessel | 1.07e-11 | 68 |
vasculature | 3.40e-10 | 78 |
vascular system | 3.40e-10 | 78 |
epithelial tube open at both ends | 1.49e-09 | 59 |
blood vessel | 1.49e-09 | 59 |
blood vasculature | 1.49e-09 | 59 |
vascular cord | 1.49e-09 | 59 |
microcirculatory vessel | 8.31e-09 | 3 |
endothelium of capillary | 8.31e-09 | 3 |
capillary | 8.31e-09 | 3 |
artery | 8.50e-09 | 42 |
arterial blood vessel | 8.50e-09 | 42 |
arterial system | 8.50e-09 | 42 |
cardiovascular system | 2.83e-07 | 109 |
circulatory system | 4.47e-07 | 112 |
splanchnic layer of lateral plate mesoderm | 8.08e-07 | 83 |
epithelial tube | 8.69e-07 | 117 |