FFCP PHASE1:Hg19::chr2:202014447..202014474,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:202014447..202014474,+ | |||
|description=CAGE_peak_at_chr2:202014447..202014474,+ | |description=CAGE_peak_at_chr2:202014447..202014474,+ | ||
|id=chr2:202014447..202014474,+ | |id=chr2:202014447..202014474,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.72e-10!254;CL:0002368!2.72e-08!13;CL:0002202!1.40e-07!9;CL:0002632!1.40e-07!9;CL:0002076!1.59e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.72e-10!254;CL:0002368!2.72e-08!13;CL:0002202!1.40e-07!9;CL:0002632!1.40e-07!9;CL:0002076!1.59e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.21e-13;13!CL:0002202;3.49e-11;9!CL:0002632;3.49e-11;9!CL:0002621;3.21e-10;3!CL:0002076;4.36e-10;42!CL:0000307;1.98e-09;3!CL:0002159;4.94e-09;14!CL:0000240;1.25e-07;6!CL:0000311;1.25e-07;6!CL:0000079;1.25e-07;6!CL:0000237;1.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.28e-15,253;CL:0002368,2.69e-13,13;CL:0002076,4.99e-12,42;CL:0002202,4.23e-11,9;CL:0002632,4.23e-11,9;CL:0002621,3.39e-10,3;CL:0000068,2.33e-09,3;CL:0000069,2.33e-09,3;CL:0000307,2.33e-09,3;CL:0000377,2.33e-09,3;CL:0002159,3.54e-09,14;CL:0000223,6.93e-09,58;CL:0000240,7.37e-08,6;CL:0000311,7.37e-08,6;CL:0000079,7.37e-08,6;CL:0000237,7.37e-08,6;CL:0000036,7.37e-08,6;CL:0000357,7.37e-08,6;CL:0000114,7.37e-08,6;CL:0000076,1.08e-07,63;CL:0002321,8.37e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;1.98e-09;3!CL:0000357;1.25e-07;6!CL:0000114;1.25e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.47e-07!169;UBERON:0000925!1.47e-07!169;UBERON:0006595!1.47e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.21e-10;3!UBERON:0004807;2.59e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.39e-10,3;UBERON:0004807,6.66e-07,28 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,2.21160542851358,0,1.52908960491121,2.63766978228454,0,0,2.01697543935533,3.01347264011988,2.92124036154949,1.46379839637152,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,3.0120591877825,1.47901604066715,0,0,0,0.553995408531877,0,0.434021741431704,0.447830948479849,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0,1.03423704220986,0,1.35426486594342,0.376484679085209,0,0.449446968890169,0.612167784741805,0.962787081228281,0,0,0.398927315243264,0,0.580418477257168,0.56738522469114,0,1.00499466102697,0.521482918420201,0.65156653411535,0,0.368277635987565,0.632924774881769,0.211255286311942,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,1.94826728407911,0.111410456885174,0.294605907474837,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0,0.175669571386252,0,1.09288586487763,1.11235332835329,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.417989933073621,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,1.74437620857014,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.67355336034844,0.653847612453835,0,0,0,0,0.570471821544449,0,0.822041490506354,0.485618833104395,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0.453728732640084,0.179389635688862,0,0,0.900273288253207,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,3.28543450377605,3.27295344709002,4.58887352622406,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0,1.97550513735526,4.49607013030478,1.91005047582099,1.20364978706088,0,0,1.44331342025273,0,0.117408694235822,0.577465791044295,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,3.35964256397719,2.83550194484773,0.806026704325635,2.03443756959773,0.766765358330422,0.492663237895943,0.176096868026452,0,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.66004457238855,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0.641715181398742,0,0,0,0,0,16.478154526838,2.99161459204025,0.414415513436035,0,0,0,0,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.426910231213777,1.5156378572313,3.32870879020994,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0.462629081407967,0.177561725313127,0.246381468041427,0.519254429183621,0.348631135379878,0.120859449591622,2.40607764363942,0.460404944679482,0.229628896329213,0.546273504020151,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0.510281115829547,0.215915916102139,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0.689182862422653,0.214840489736547,0,0.0852266274161009,0,2.47927373041467,0,5.48734663726712,0.4046311234222,0,0.62962469366128,0,0.616067160352178,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0,0.359744915166629,0,0,0.808729926293264,0,0,0,0.731140468893853,1.05650146756755,0,0,0,0,0,0.876901770507525,0.578775534266688,0,0.608731130888112,1.239293992399,0.563391205064483,0.143411352204052,0.392996164052485,0.7133421029625,0,0,0,0,0,2.79044126903985,3.35151137767894,1.08890984861323,0.188287601553558,1.29151611801369,0,0.443430153536676,0,0,0.764637207142375,1.70894156152249,0.238231775457789,0.822724546172388,0,1.08006287447623,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0,0,1.25815691606258,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0,0,0,0.762760950878299,0,0,0,0,0.885741385813839,2.65312164975897,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.176915129006678,1.83309043480088,0,0.123563938946503,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0.586993856796269,0.242780379534093,0,0,0,0,0,0,0.664653872707185,0.661983911750998,0,0,0,0.138674673013139,0,2.84177952501695,0.522355239482415,0.17472666824203,2.23581842213102,0,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| ||
|short_description=p@chr2:202014447..202014474,+ | |short_description=p@chr2:202014447..202014474,+ | ||
}} | }} |
Latest revision as of 05:01, 29 July 2015
Short description: | p@chr2:202014447..202014474, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:202014447..202014474, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.28e-15 | 253 |
respiratory epithelial cell | 2.69e-13 | 13 |
endo-epithelial cell | 4.99e-12 | 42 |
epithelial cell of tracheobronchial tree | 4.23e-11 | 9 |
epithelial cell of lower respiratory tract | 4.23e-11 | 9 |
gingival epithelial cell | 3.39e-10 | 3 |
duct epithelial cell | 2.33e-09 | 3 |
branched duct epithelial cell | 2.33e-09 | 3 |
tracheal epithelial cell | 2.33e-09 | 3 |
tracheoblast | 2.33e-09 | 3 |
general ecto-epithelial cell | 3.54e-09 | 14 |
endodermal cell | 6.93e-09 | 58 |
stratified squamous epithelial cell | 7.37e-08 | 6 |
keratin accumulating cell | 7.37e-08 | 6 |
stratified epithelial cell | 7.37e-08 | 6 |
keratinizing barrier epithelial cell | 7.37e-08 | 6 |
epithelial fate stem cell | 7.37e-08 | 6 |
stratified epithelial stem cell | 7.37e-08 | 6 |
surface ectodermal cell | 7.37e-08 | 6 |
squamous epithelial cell | 1.08e-07 | 63 |
embryonic cell | 8.37e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.39e-10 | 3 |
respiratory system epithelium | 6.66e-07 | 28 |