FFCP PHASE1:Hg19::chr2:20424844..20424863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=6382 | |EntrezGene=entrezgene:6382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=10658 | |HGNC=HGNC:10658 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=E9PHH3,F8WCX9 | |UniProt=uniprot:E9PHH3,uniprot:F8WCX9 | ||
|association_with_transcript=0bp_to_ENST00000403076,ENST00000447124_5end | |association_with_transcript=0bp_to_ENST00000403076,ENST00000447124_5end | ||
|cluster_id=chr2:20424844..20424863,- | |||
|coexpression_cluster_id=C572 | |coexpression_cluster_id=C572 | ||
|description=CAGE_peak_2_at_SDC1_5end | |description=CAGE_peak_2_at_SDC1_5end |
Revision as of 05:15, 29 July 2015
Short description: | p2@SDC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SDC1_5end |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | 0bp_to_ENST00000403076, ENST00000447124_5end |
EntrezGene: | 6382 |
HGNC: | 10658 |
UniProt: | E9PHH3F8WCX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SDC1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.02e-32 | 253 |
endodermal cell | 7.22e-19 | 58 |
embryonic cell | 4.75e-18 | 250 |
endo-epithelial cell | 1.03e-17 | 42 |
respiratory epithelial cell | 4.46e-09 | 13 |
epithelial cell of alimentary canal | 1.19e-07 | 20 |
epithelial cell of tracheobronchial tree | 9.39e-07 | 9 |
epithelial cell of lower respiratory tract | 9.39e-07 | 9 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.16e-25 | 160 |
endoderm | 1.16e-25 | 160 |
presumptive endoderm | 1.16e-25 | 160 |
digestive system | 1.57e-19 | 145 |
digestive tract | 1.57e-19 | 145 |
primitive gut | 1.57e-19 | 145 |
trunk | 3.50e-18 | 199 |
subdivision of digestive tract | 3.58e-16 | 118 |
trunk region element | 1.24e-15 | 101 |
surface structure | 5.82e-15 | 99 |
Showing 1 to 10 of 40 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.90e-14 | 106 |
cell type cancer | 1.96e-11 | 143 |
Showing 1 to 2 of 2 entries