FFCP PHASE1:Hg19::chr2:208193998..208194030,+: Difference between revisions
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|id=chr2:208193998..208194030,+
|short_description=p@chr2:208193998..208194030,+
|description=CAGE_peak_at_chr2:208193998..208194030,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:208193998..208194030,+ | |||
|description=CAGE_peak_at_chr2:208193998..208194030,+ | |||
|id=chr2:208193998..208194030,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.03e-17!119;CL:0000945!1.53e-16!24;CL:0000826!1.53e-16!24;CL:0002031!2.57e-16!124;CL:0000988!5.96e-15!182;CL:0000738!3.97e-14!140;CL:0000080!2.51e-13!6;CL:0000838!7.95e-12!52;CL:0000542!1.41e-11!53;CL:0000051!1.41e-11!53;CL:0002032!1.51e-11!165;CL:0000837!1.51e-11!165;CL:0002057!1.51e-11!42;CL:0000037!5.87e-11!172;CL:0000566!5.87e-11!172;CL:0000860!1.04e-10!45;CL:0000946!5.79e-10!1;CL:0000786!5.79e-10!1;CL:0000980!5.79e-10!1;CL:0002194!3.19e-07!63;CL:0000576!3.19e-07!63;CL:0000040!3.19e-07!63;CL:0000559!3.19e-07!63;CL:0002009!5.67e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000946;5.97e-34;1!CL:0000786;5.97e-34;1!CL:0000945;4.37e-13;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.85e-34,1;CL:0000786,9.85e-34,1;CL:0000980,9.85e-34,1;CL:0000785,1.27e-17,2;CL:0000955,1.27e-17,2;CL:0000818,1.27e-17,2;CL:0000954,1.27e-17,2;CL:0000816,1.27e-17,2;CL:0000945,4.65e-13,24;CL:0000826,4.65e-13,24;CL:0000817,3.24e-12,3;CL:0000838,1.09e-10,52;CL:0000542,1.69e-10,53;CL:0000051,1.69e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000954;9.86e-18;2 | |||
|ontology_enrichment_disease=DOID:0060060!4.46e-10!1;DOID:0060061!4.46e-10!1;DOID:8691!4.46e-10!1;DOID:630!4.87e-10!1;DOID:0050177!4.87e-10!1;DOID:0050427!4.87e-10!1;DOID:4960!5.31e-10!1;DOID:0070004!5.31e-10!1;DOID:0060058!3.30e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:630;5.97e-34;1!DOID:0050177;5.97e-34;1!DOID:0060060;5.97e-34;1!DOID:4960;5.97e-34;1!DOID:0060061;5.97e-34;1!DOID:0070004;5.97e-34;1!DOID:0050427;5.97e-34;1!DOID:8691;5.97e-34;1!DOID:0060058;3.04e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.61e-34,1;DOID:0060061,3.61e-34,1;DOID:8691,3.61e-34,1;DOID:630,5.05e-34,1;DOID:0050177,5.05e-34,1;DOID:0050427,5.05e-34,1;DOID:4960,7.06e-34,1;DOID:0070004,7.06e-34,1;DOID:0060058,2.66e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-11!102;UBERON:0003061!1.86e-11!102;UBERON:0002193!3.05e-10!112;UBERON:0007029!1.25e-09!1;UBERON:0002331!3.38e-08!10;UBERON:0000358!3.38e-08!10;UBERON:0000307!3.38e-08!10;UBERON:0000091!3.38e-08!10;UBERON:0000087!3.38e-08!10;UBERON:0007806!3.38e-08!10;UBERON:0008780!3.38e-08!10;UBERON:0005728!3.38e-08!10;UBERON:0002371!5.48e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.96e-12;3!UBERON:0002390;1.21e-09;32!UBERON:0004177;5.54e-08;5!UBERON:0005057;5.54e-08;5!UBERON:0002193;9.16e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.85e-12,3;UBERON:0004854,1.85e-12,3;UBERON:0009034,1.85e-12,3;UBERON:0002095,1.85e-12,3;UBERON:0004782,1.85e-12,3;UBERON:0003281,1.85e-12,3;UBERON:0009664,1.85e-12,3;UBERON:0002296,1.85e-12,3;UBERON:0005602,1.85e-12,3;UBERON:0001179,1.85e-12,3;UBERON:0006293,1.85e-12,3 | |||
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|short_description=p@chr2:208193998..208194030,+ | |||
}} | }} |
Latest revision as of 05:28, 29 July 2015
Short description: | p@chr2:208193998..208194030, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:208193998..208194030, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.85e-34 | 1 |
plasma cell | 9.85e-34 | 1 |
plasmablast | 9.85e-34 | 1 |
mature B cell | 1.27e-17 | 2 |
pre-B-II cell | 1.27e-17 | 2 |
transitional stage B cell | 1.27e-17 | 2 |
small pre-B-II cell | 1.27e-17 | 2 |
immature B cell | 1.27e-17 | 2 |
lymphocyte of B lineage | 4.65e-13 | 24 |
pro-B cell | 4.65e-13 | 24 |
precursor B cell | 3.24e-12 | 3 |
lymphoid lineage restricted progenitor cell | 1.09e-10 | 52 |
lymphocyte | 1.69e-10 | 53 |
common lymphoid progenitor | 1.69e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.85e-12 | 3 |
gastrointestinal system mesentery | 1.85e-12 | 3 |
stomach region | 1.85e-12 | 3 |
mesentery | 1.85e-12 | 3 |
gastrointestinal system serosa | 1.85e-12 | 3 |
mesentery of stomach | 1.85e-12 | 3 |
gut mesentery | 1.85e-12 | 3 |
dorsal mesentery | 1.85e-12 | 3 |
dorsal mesogastrium | 1.85e-12 | 3 |
peritoneal cavity | 1.85e-12 | 3 |
spleen primordium | 1.85e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.61e-34 | 1 |
cutaneous T cell lymphoma | 3.61e-34 | 1 |
mycosis fungoides | 3.61e-34 | 1 |
genetic disease | 5.05e-34 | 1 |
monogenic disease | 5.05e-34 | 1 |
xeroderma pigmentosum | 5.05e-34 | 1 |
bone marrow cancer | 7.06e-34 | 1 |
myeloma | 7.06e-34 | 1 |
lymphoma | 2.66e-14 | 10 |