FFCP PHASE1:Hg19::chr2:209407420..209407435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:209407420..209407435,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_at_chr2:209407420..209407435,+ | |description=CAGE_peak_at_chr2:209407420..209407435,+ | ||
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|ontology_enrichment_celltype=CL:0001024!4.54e-09!1;CL:0002274!5.15e-07!5;CL:0000457!5.15e-07!5;CL:0002191!5.15e-07!5;CL:0000097!5.15e-07!5;CL:0000831!5.15e-07!5;CL:0002028!5.15e-07!5 | |ontology_enrichment_celltype=CL:0001024!4.54e-09!1;CL:0002274!5.15e-07!5;CL:0000457!5.15e-07!5;CL:0002191!5.15e-07!5;CL:0000097!5.15e-07!5;CL:0000831!5.15e-07!5;CL:0002028!5.15e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.73e-11;2 | |ontology_enrichment_celltype_v019=CL:0002535;2.73e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.73e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.98e-21;1!UBERON:0003918;8.92e-19;10!UBERON:0007687;8.92e-19;10!UBERON:0003104;1.31e-10;31 | |ontology_enrichment_development_v019=UBERON:0006242;6.98e-21;1!UBERON:0003918;8.92e-19;10!UBERON:0007687;8.92e-19;10!UBERON:0003104;1.31e-10;31 | ||
|ontology_enrichment_disease=DOID:1036!3.51e-24!8;DOID:8692!1.61e-11!31;DOID:1240!5.42e-09!39 | |ontology_enrichment_disease=DOID:1036!3.51e-24!8;DOID:8692!1.61e-11!31;DOID:1240!5.42e-09!39 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.73e-11;2!DOID:1036;8.90e-11;8 | |ontology_enrichment_disease_v019=DOID:3493;2.73e-11;2!DOID:1036;8.90e-11;8 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,3.02e-11,2;DOID:1036,8.06e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0002113!6.75e-10!27;UBERON:0003918!6.75e-10!27;UBERON:0005095!6.75e-10!27;UBERON:0007687!6.75e-10!27;UBERON:0001301!7.27e-09!1;UBERON:0000489!2.85e-08!32;UBERON:0005172!6.53e-08!55;UBERON:0005173!6.53e-08!55;UBERON:0002417!5.00e-07!61;UBERON:0000916!5.00e-07!61 | |ontology_enrichment_uberon=UBERON:0002113!6.75e-10!27;UBERON:0003918!6.75e-10!27;UBERON:0005095!6.75e-10!27;UBERON:0007687!6.75e-10!27;UBERON:0001301!7.27e-09!1;UBERON:0000489!2.85e-08!32;UBERON:0005172!6.53e-08!55;UBERON:0005173!6.53e-08!55;UBERON:0002417!5.00e-07!61;UBERON:0000916!5.00e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.73e-11;2!UBERON:0004801;2.73e-11;2!UBERON:0002113;3.37e-08;24!UBERON:0011143;3.37e-08;24!UBERON:0002110;7.50e-08;3!UBERON:0000489;7.03e-07;29 | |ontology_enrichment_uberon_v019=UBERON:0006955;2.73e-11;2!UBERON:0004801;2.73e-11;2!UBERON:0002113;3.37e-08;24!UBERON:0011143;3.37e-08;24!UBERON:0002110;7.50e-08;3!UBERON:0000489;7.03e-07;29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.73e-11,2;UBERON:0004801,2.73e-11,2;UBERON:0002110,7.76e-08,3;UBERON:0006242,7.76e-08,3;UBERON:0002113,1.30e-07,26;UBERON:0003918,1.30e-07,26;UBERON:0011143,1.30e-07,26;UBERON:0005095,1.30e-07,26;UBERON:0007687,1.30e-07,26 | |||
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|short_description=p@chr2:209407420..209407435,+ | |short_description=p@chr2:209407420..209407435,+ | ||
}} | }} |
Latest revision as of 05:35, 29 July 2015
Short description: | p@chr2:209407420..209407435, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:209407420..209407435, + |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.73e-11 | 2 |
cervix epithelium | 2.73e-11 | 2 |
gallbladder | 7.76e-08 | 3 |
gall bladder primordium | 7.76e-08 | 3 |
kidney | 1.30e-07 | 26 |
kidney mesenchyme | 1.30e-07 | 26 |
upper urinary tract | 1.30e-07 | 26 |
kidney rudiment | 1.30e-07 | 26 |
kidney field | 1.30e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.02e-11 | 2 |
chronic leukemia | 8.06e-11 | 8 |