FFCP PHASE1:Hg19::chr2:213886835..213886850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:213886835..213886850,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr2:213886835..213886850,- | |description=CAGE_peak_at_chr2:213886835..213886850,- | ||
|id=chr2:213886835..213886850,- | |id=chr2:213886835..213886850,- | ||
|ontology_enrichment_celltype=CL:0000542!1.00e-13!53;CL:0000051!1.00e-13!53;CL:0000945!5.28e-13!24;CL:0000826!5.28e-13!24;CL:0000838!6.32e-12!52;CL:0000785!3.33e-11!2;CL:0000955!3.33e-11!2;CL:0000818!3.33e-11!2;CL:0000954!3.33e-11!2;CL:0000816!3.33e-11!2;CL:0000817!9.55e-08!3 | |ontology_enrichment_celltype=CL:0000542!1.00e-13!53;CL:0000051!1.00e-13!53;CL:0000945!5.28e-13!24;CL:0000826!5.28e-13!24;CL:0000838!6.32e-12!52;CL:0000785!3.33e-11!2;CL:0000955!3.33e-11!2;CL:0000818!3.33e-11!2;CL:0000954!3.33e-11!2;CL:0000816!3.33e-11!2;CL:0000817!9.55e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.59e-33;24!CL:0000946;6.78e-18;1!CL:0000786;6.78e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.51e-33,24;CL:0000826,1.51e-33,24;CL:0000946,7.37e-18,1;CL:0000786,7.37e-18,1;CL:0000980,7.37e-18,1;CL:0000838,2.46e-15,52;CL:0000542,4.86e-15,53;CL:0000051,4.86e-15,53;CL:0000785,1.33e-09,2;CL:0000955,1.33e-09,2;CL:0000818,1.33e-09,2;CL:0000954,1.33e-09,2;CL:0000816,1.33e-09,2;CL:0000817,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.27e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.67e-08!10;DOID:630!9.81e-07!1;DOID:0050177!9.81e-07!1;DOID:0050427!9.81e-07!1 | |ontology_enrichment_disease=DOID:0060058!1.67e-08!10;DOID:630!9.81e-07!1;DOID:0050177!9.81e-07!1;DOID:0050427!9.81e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:630;6.78e-18;1!DOID:0050177;6.78e-18;1!DOID:0050427;6.78e-18;1!DOID:2355;1.22e-17;1!DOID:74;1.71e-09;2!DOID:0060058;1.47e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.23e-18,1;DOID:0050177,6.23e-18,1;DOID:0050427,6.23e-18,1;DOID:2355,1.03e-17,1;DOID:74,1.57e-09,2;DOID:0060058,1.42e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.13e-07!3;UBERON:0004854!1.13e-07!3;UBERON:0009034!1.13e-07!3;UBERON:0002095!1.13e-07!3;UBERON:0004782!1.13e-07!3;UBERON:0003281!1.13e-07!3;UBERON:0009664!1.13e-07!3;UBERON:0002296!1.13e-07!3;UBERON:0005602!1.13e-07!3;UBERON:0001179!1.13e-07!3;UBERON:0006293!1.13e-07!3;UBERON:0004177!4.73e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.88e-07,3;UBERON:0004854,6.88e-07,3;UBERON:0009034,6.88e-07,3;UBERON:0002095,6.88e-07,3;UBERON:0004782,6.88e-07,3;UBERON:0003281,6.88e-07,3;UBERON:0009664,6.88e-07,3;UBERON:0002296,6.88e-07,3;UBERON:0005602,6.88e-07,3;UBERON:0001179,6.88e-07,3;UBERON:0006293,6.88e-07,3 | |||
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|short_description=p@chr2:213886835..213886850,- | |short_description=p@chr2:213886835..213886850,- | ||
}} | }} |
Latest revision as of 05:55, 29 July 2015
Short description: | p@chr2:213886835..213886850, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:213886835..213886850, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.51e-33 | 24 |
pro-B cell | 1.51e-33 | 24 |
antibody secreting cell | 7.37e-18 | 1 |
plasma cell | 7.37e-18 | 1 |
plasmablast | 7.37e-18 | 1 |
lymphoid lineage restricted progenitor cell | 2.46e-15 | 52 |
lymphocyte | 4.86e-15 | 53 |
common lymphoid progenitor | 4.86e-15 | 53 |
mature B cell | 1.33e-09 | 2 |
pre-B-II cell | 1.33e-09 | 2 |
transitional stage B cell | 1.33e-09 | 2 |
small pre-B-II cell | 1.33e-09 | 2 |
immature B cell | 1.33e-09 | 2 |
precursor B cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.88e-07 | 3 |
gastrointestinal system mesentery | 6.88e-07 | 3 |
stomach region | 6.88e-07 | 3 |
mesentery | 6.88e-07 | 3 |
gastrointestinal system serosa | 6.88e-07 | 3 |
mesentery of stomach | 6.88e-07 | 3 |
gut mesentery | 6.88e-07 | 3 |
dorsal mesentery | 6.88e-07 | 3 |
dorsal mesogastrium | 6.88e-07 | 3 |
peritoneal cavity | 6.88e-07 | 3 |
spleen primordium | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.23e-18 | 1 |
monogenic disease | 6.23e-18 | 1 |
xeroderma pigmentosum | 6.23e-18 | 1 |
anemia | 1.03e-17 | 1 |
hematopoietic system disease | 1.57e-09 | 2 |
lymphoma | 1.42e-07 | 10 |