FFCP PHASE1:Hg19::chr2:216638374..216638390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216638374..216638390,- | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr2:216638374..216638390,- | |description=CAGE_peak_at_chr2:216638374..216638390,- | ||
|id=chr2:216638374..216638390,- | |id=chr2:216638374..216638390,- | ||
|ontology_enrichment_celltype=CL:0000055!1.81e-14!180;CL:0002540!2.15e-10!6;CL:0002494!3.81e-10!16;CL:0000048!1.80e-09!430;CL:0000723!3.42e-09!436;CL:1000306!3.49e-09!4;CL:0002547!3.49e-09!4;CL:0000034!7.85e-09!444;CL:0000515!8.74e-09!4;CL:0002575!2.01e-08!2;CL:0000057!2.57e-08!75;CL:0002589!2.70e-08!2;CL:0000680!6.46e-08!57;CL:0000056!6.46e-08!57;CL:0000355!6.46e-08!57;CL:0002371!9.03e-08!591;CL:0000359!9.10e-08!32 | |ontology_enrichment_celltype=CL:0000055!1.81e-14!180;CL:0002540!2.15e-10!6;CL:0002494!3.81e-10!16;CL:0000048!1.80e-09!430;CL:0000723!3.42e-09!436;CL:1000306!3.49e-09!4;CL:0002547!3.49e-09!4;CL:0000034!7.85e-09!444;CL:0000515!8.74e-09!4;CL:0002575!2.01e-08!2;CL:0000057!2.57e-08!75;CL:0002589!2.70e-08!2;CL:0000680!6.46e-08!57;CL:0000056!6.46e-08!57;CL:0000355!6.46e-08!57;CL:0002371!9.03e-08!591;CL:0000359!9.10e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0002592;5.96e-34;3!CL:1000306;5.56e-26;4!CL:0002547;5.56e-26;4!CL:0002494;1.54e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,5.96e-34,3;CL:1000306,5.56e-26,4;CL:0002547,5.56e-26,4;CL:0002494,1.54e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!3.49e-09!4;UBERON:0007240!3.49e-09!4;UBERON:0005742!3.49e-09!4;UBERON:0005734!3.49e-09!4;UBERON:0004664!3.49e-09!4;UBERON:0004663!3.49e-09!4;UBERON:0002119!6.87e-09!4;UBERON:0004531!6.87e-09!4;UBERON:0001637!2.03e-08!42;UBERON:0003509!2.03e-08!42;UBERON:0004572!2.03e-08!42;UBERON:0004535!2.46e-08!110;UBERON:0001529!2.70e-08!2;UBERON:0007204!2.70e-08!2;UBERON:0001009!5.39e-08!113;UBERON:0004573!1.61e-07!33;UBERON:0004571!1.61e-07!33;UBERON:0004872!2.31e-07!84;UBERON:0001134!3.22e-07!61;UBERON:0002036!3.22e-07!61;UBERON:0003082!3.22e-07!61;UBERON:0005284!3.33e-07!5;UBERON:0002049!5.23e-07!79;UBERON:0007798!5.23e-07!79;UBERON:0002385!6.64e-07!63;UBERON:0001015!6.64e-07!63;UBERON:0000383!6.64e-07!63 | |ontology_enrichment_uberon=UBERON:0000415!3.49e-09!4;UBERON:0007240!3.49e-09!4;UBERON:0005742!3.49e-09!4;UBERON:0005734!3.49e-09!4;UBERON:0004664!3.49e-09!4;UBERON:0004663!3.49e-09!4;UBERON:0002119!6.87e-09!4;UBERON:0004531!6.87e-09!4;UBERON:0001637!2.03e-08!42;UBERON:0003509!2.03e-08!42;UBERON:0004572!2.03e-08!42;UBERON:0004535!2.46e-08!110;UBERON:0001529!2.70e-08!2;UBERON:0007204!2.70e-08!2;UBERON:0001009!5.39e-08!113;UBERON:0004573!1.61e-07!33;UBERON:0004571!1.61e-07!33;UBERON:0004872!2.31e-07!84;UBERON:0001134!3.22e-07!61;UBERON:0002036!3.22e-07!61;UBERON:0003082!3.22e-07!61;UBERON:0005284!3.33e-07!5;UBERON:0002049!5.23e-07!79;UBERON:0007798!5.23e-07!79;UBERON:0002385!6.64e-07!63;UBERON:0001015!6.64e-07!63;UBERON:0000383!6.64e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;5.96e-34;3!UBERON:0005985;5.96e-34;3!UBERON:0001621;5.96e-34;3!UBERON:0004797;5.56e-26;4!UBERON:0000415;5.56e-26;4!UBERON:0007240;5.56e-26;4!UBERON:0005742;5.56e-26;4!UBERON:0005734;5.56e-26;4!UBERON:0004664;5.56e-26;4!UBERON:0004663;5.56e-26;4!UBERON:0004573;4.10e-12;33!UBERON:0004571;4.10e-12;33!UBERON:0001637;1.64e-10;42!UBERON:0003509;1.64e-10;42!UBERON:0004572;1.64e-10;42!UBERON:0007500;1.98e-08;56!UBERON:0001981;1.98e-08;56!UBERON:0004537;1.98e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,5.96e-34,3;UBERON:0000415,5.56e-26,4;UBERON:0007240,5.56e-26,4;UBERON:0005742,5.56e-26,4;UBERON:0005734,5.56e-26,4;UBERON:0004664,5.56e-26,4;UBERON:0004663,5.56e-26,4;UBERON:0003498,5.15e-21,5;UBERON:0005985,5.15e-21,5;UBERON:0004797,1.65e-15,7;UBERON:0004573,2.96e-13,33;UBERON:0004571,2.96e-13,33;UBERON:0001637,1.07e-10,42;UBERON:0003509,1.07e-10,42;UBERON:0004572,1.07e-10,42;UBERON:0007500,5.66e-08,59;UBERON:0001981,5.66e-08,59;UBERON:0004537,5.66e-08,59;UBERON:0006965,5.66e-08,59;UBERON:0000055,4.47e-07,68 | |||
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| ||
|short_description=p@chr2:216638374..216638390,- | |short_description=p@chr2:216638374..216638390,- | ||
}} | }} |
Latest revision as of 06:20, 29 July 2015
Short description: | p@chr2:216638374..216638390, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216638374..216638390, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 5.96e-34 | 3 |
fibroblast of tunica adventitia of artery | 5.56e-26 | 4 |
fibroblast of the aortic adventitia | 5.56e-26 | 4 |
cardiocyte | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 5.96e-34 | 3 |
artery wall | 5.56e-26 | 4 |
tunica adventitia of artery | 5.56e-26 | 4 |
adventitia | 5.56e-26 | 4 |
tunica adventitia of blood vessel | 5.56e-26 | 4 |
aorta tunica adventitia | 5.56e-26 | 4 |
aorta wall | 5.56e-26 | 4 |
heart blood vessel | 5.15e-21 | 5 |
coronary vessel | 5.15e-21 | 5 |
blood vessel layer | 1.65e-15 | 7 |
systemic artery | 2.96e-13 | 33 |
systemic arterial system | 2.96e-13 | 33 |
artery | 1.07e-10 | 42 |
arterial blood vessel | 1.07e-10 | 42 |
arterial system | 1.07e-10 | 42 |
epithelial tube open at both ends | 5.66e-08 | 59 |
blood vessel | 5.66e-08 | 59 |
blood vasculature | 5.66e-08 | 59 |
vascular cord | 5.66e-08 | 59 |
vessel | 4.47e-07 | 68 |