FFCP PHASE1:Hg19::chr2:220312468..220312502,+: Difference between revisions
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|id=chr2:220312468..220312502,+
|short_description=p@chr2:220312468..220312502,+
|description=CAGE_peak_at_chr2:220312468..220312502,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:220312468..220312502,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr2:220312468..220312502,+ | |||
|id=chr2:220312468..220312502,+ | |||
|ontology_enrichment_celltype=CL:0000128!1.53e-07!7;CL:0000126!1.53e-07!7;CL:0000127!1.53e-07!7;CL:0002453!1.53e-07!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.62e-07;3!DOID:127;3.62e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.63e-07,3;DOID:127,3.63e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.94e-42!115;UBERON:0001049!3.26e-27!57;UBERON:0005068!3.26e-27!57;UBERON:0006241!3.26e-27!57;UBERON:0007135!3.26e-27!57;UBERON:0003075!1.60e-26!86;UBERON:0007284!1.60e-26!86;UBERON:0002346!1.08e-24!90;UBERON:0005743!9.52e-22!86;UBERON:0002616!4.07e-21!59;UBERON:0000073!1.24e-19!94;UBERON:0001016!1.24e-19!94;UBERON:0001017!2.06e-19!82;UBERON:0002780!1.37e-17!41;UBERON:0001890!1.37e-17!41;UBERON:0006240!1.37e-17!41;UBERON:0000955!3.28e-17!69;UBERON:0006238!3.28e-17!69;UBERON:0003080!5.43e-17!42;UBERON:0002020!2.06e-16!34;UBERON:0003528!2.06e-16!34;UBERON:0001893!5.42e-16!34;UBERON:0001869!8.05e-16!32;UBERON:0002791!3.69e-15!33;UBERON:0003056!1.15e-14!61;UBERON:0000956!7.03e-14!25;UBERON:0000203!7.03e-14!25;UBERON:0003076!6.16e-12!15;UBERON:0003057!6.16e-12!15;UBERON:0000153!1.58e-11!129;UBERON:0007811!1.58e-11!129;UBERON:0000033!3.04e-11!123;UBERON:0000025!7.25e-11!194;UBERON:0000481!1.07e-10!347;UBERON:0002619!1.33e-10!22;UBERON:0004121!3.10e-10!169;UBERON:0001950!3.97e-10!20;UBERON:0000924!1.08e-09!173;UBERON:0006601!1.08e-09!173;UBERON:0000483!3.77e-09!309;UBERON:0004111!4.13e-09!241;UBERON:0000119!6.97e-09!312;UBERON:0004733!1.42e-08!12;UBERON:0002028!1.42e-08!12;UBERON:0007277!1.42e-08!12;UBERON:0004732!9.20e-08!13;UBERON:0002680!2.28e-07!9;UBERON:0001895!2.28e-07!9;UBERON:0010092!2.28e-07!9;UBERON:0000477!3.61e-07!286;UBERON:0000475!7.23e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.32e-11;17!UBERON:0005409;7.90e-11;22!UBERON:0000059;5.55e-10;11!UBERON:0004921;2.47e-08;33!UBERON:0001155;2.80e-08;9!UBERON:0004175;4.51e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.32e-13,114;UBERON:0000160,5.34e-11,17;UBERON:0000059,4.59e-10,11;UBERON:0005409,2.02e-09,25;UBERON:0001155,2.65e-08,9 | |||
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| ||
|short_description=p@chr2:220312468..220312502,+ | |||
}} | }} |
Latest revision as of 06:57, 29 July 2015
Short description: | p@chr2:220312468..220312502, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:220312468..220312502, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.32e-13 | 114 |
intestine | 5.34e-11 | 17 |
large intestine | 4.59e-10 | 11 |
gastrointestinal system | 2.02e-09 | 25 |
colon | 2.65e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.63e-07 | 3 |
leiomyoma | 3.63e-07 | 3 |