FFCP PHASE1:Hg19::chr2:231454365..231454375,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:231454365..231454375,- | |||
|coexpression_cluster_id=C2032 | |||
|description=CAGE_peak_at_chr2:231454365..231454375,- | |description=CAGE_peak_at_chr2:231454365..231454375,- | ||
|id=chr2:231454365..231454375,- | |id=chr2:231454365..231454375,- | ||
|ontology_enrichment_celltype=CL:0000945!1.69e-81!24;CL:0000826!1.69e-81!24;CL:0000542!7.75e-43!53;CL:0000051!7.75e-43!53;CL:0000838!1.40e-39!52;CL:0000236!2.55e-39!14;CL:0002087!3.51e-18!119;CL:0002031!1.51e-15!124;CL:0000738!9.14e-15!140;CL:0000785!2.22e-12!2;CL:0000955!2.22e-12!2;CL:0000818!2.22e-12!2;CL:0000954!2.22e-12!2;CL:0000816!2.22e-12!2;CL:0002032!7.86e-12!165;CL:0000837!7.86e-12!165;CL:0000988!1.65e-11!182;CL:0000037!3.67e-11!172;CL:0000566!3.67e-11!172;CL:0000817!1.54e-08!3;CL:0000946!2.36e-07!1;CL:0000786!2.36e-07!1;CL:0000980!2.36e-07!1 | |ontology_enrichment_celltype=CL:0000945!1.69e-81!24;CL:0000826!1.69e-81!24;CL:0000542!7.75e-43!53;CL:0000051!7.75e-43!53;CL:0000838!1.40e-39!52;CL:0000236!2.55e-39!14;CL:0002087!3.51e-18!119;CL:0002031!1.51e-15!124;CL:0000738!9.14e-15!140;CL:0000785!2.22e-12!2;CL:0000955!2.22e-12!2;CL:0000818!2.22e-12!2;CL:0000954!2.22e-12!2;CL:0000816!2.22e-12!2;CL:0002032!7.86e-12!165;CL:0000837!7.86e-12!165;CL:0000988!1.65e-11!182;CL:0000037!3.67e-11!172;CL:0000566!3.67e-11!172;CL:0000817!1.54e-08!3;CL:0000946!2.36e-07!1;CL:0000786!2.36e-07!1;CL:0000980!2.36e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.74e-37;24!CL:0000946;3.58e-26;1!CL:0000786;3.58e-26;1!CL:0000236;1.02e-17;13!CL:0000542;3.85e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.74e-37,24;CL:0000826,6.74e-37,24;CL:0000236,1.20e-28,14;CL:0000946,3.58e-26,1;CL:0000786,3.58e-26,1;CL:0000980,3.58e-26,1;CL:0000838,2.82e-23,52;CL:0000542,7.68e-23,53;CL:0000051,7.68e-23,53;CL:0000785,8.28e-14,2;CL:0000955,8.28e-14,2;CL:0000818,8.28e-14,2;CL:0000954,8.28e-14,2;CL:0000816,8.28e-14,2;CL:0002087,1.81e-10,115;CL:0002031,4.92e-10,120;CL:0000817,1.19e-09,3;CL:0000738,7.43e-09,136;CL:0002032,1.79e-07,161;CL:0000837,1.79e-07,161;CL:0000037,3.70e-07,168;CL:0000988,8.67e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;8.28e-14;2!CL:0000051;3.85e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.17e-19!10;DOID:2531!2.17e-07!51;DOID:0060083!2.17e-07!51;DOID:630!3.36e-07!1;DOID:0050177!3.36e-07!1;DOID:0050427!3.36e-07!1;DOID:2355!4.78e-07!1 | |ontology_enrichment_disease=DOID:0060058!1.17e-19!10;DOID:2531!2.17e-07!51;DOID:0060083!2.17e-07!51;DOID:630!3.36e-07!1;DOID:0050177!3.36e-07!1;DOID:0050427!3.36e-07!1;DOID:2355!4.78e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.39e-17!3;UBERON:0004854!2.39e-17!3;UBERON:0009034!2.39e-17!3;UBERON:0002095!2.39e-17!3;UBERON:0004782!2.39e-17!3;UBERON:0003281!2.39e-17!3;UBERON:0009664!2.39e-17!3;UBERON:0002296!2.39e-17!3;UBERON:0005602!2.39e-17!3;UBERON:0001179!2.39e-17!3;UBERON:0006293!2.39e-17!3;UBERON:0004177!9.44e-13!7;UBERON:0001736!3.57e-07!1;UBERON:0006298!3.57e-07!1;UBERON:0001154!5.69e-07!1;UBERON:0001153!5.69e-07!1;UBERON:0002372!6.02e-07!1;UBERON:0001961!6.02e-07!1;UBERON:0001744!6.02e-07!1;UBERON:0001735!6.02e-07!1;UBERON:0000945!8.38e-07!8;UBERON:0010039!8.38e-07!8 | |ontology_enrichment_uberon=UBERON:0002106!2.39e-17!3;UBERON:0004854!2.39e-17!3;UBERON:0009034!2.39e-17!3;UBERON:0002095!2.39e-17!3;UBERON:0004782!2.39e-17!3;UBERON:0003281!2.39e-17!3;UBERON:0009664!2.39e-17!3;UBERON:0002296!2.39e-17!3;UBERON:0005602!2.39e-17!3;UBERON:0001179!2.39e-17!3;UBERON:0006293!2.39e-17!3;UBERON:0004177!9.44e-13!7;UBERON:0001736!3.57e-07!1;UBERON:0006298!3.57e-07!1;UBERON:0001154!5.69e-07!1;UBERON:0001153!5.69e-07!1;UBERON:0002372!6.02e-07!1;UBERON:0001961!6.02e-07!1;UBERON:0001744!6.02e-07!1;UBERON:0001735!6.02e-07!1;UBERON:0000945!8.38e-07!8;UBERON:0010039!8.38e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.10e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.10e-09,3;UBERON:0004854,1.10e-09,3;UBERON:0009034,1.10e-09,3;UBERON:0002095,1.10e-09,3;UBERON:0004782,1.10e-09,3;UBERON:0003281,1.10e-09,3;UBERON:0009664,1.10e-09,3;UBERON:0002296,1.10e-09,3;UBERON:0005602,1.10e-09,3;UBERON:0001179,1.10e-09,3;UBERON:0006293,1.10e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.47781061009902,1.25937250101887,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,1.77901850772711,0.853460445133014,0.800791974072025,0.574752439954483,1.98313461835459,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5206344398656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07421177600403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,3.7977639251473,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.5388164241167,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.47781061009902,1.25937250101887,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,1.77901850772711,0.853460445133014,0.800791974072025,0.574752439954483,1.98313461835459,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5206344398656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07421177600403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,3.7977639251473,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.5388164241167,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p@chr2:231454365..231454375,- | |short_description=p@chr2:231454365..231454375,- | ||
}} | }} |
Latest revision as of 07:33, 29 July 2015
Short description: | p@chr2:231454365..231454375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:231454365..231454375, - |
Coexpression cluster: | C2032_splenic_hairy_plasma_CD19_B_xeroderma_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.74e-37 | 24 |
pro-B cell | 6.74e-37 | 24 |
B cell | 1.20e-28 | 14 |
antibody secreting cell | 3.58e-26 | 1 |
plasma cell | 3.58e-26 | 1 |
plasmablast | 3.58e-26 | 1 |
lymphoid lineage restricted progenitor cell | 2.82e-23 | 52 |
lymphocyte | 7.68e-23 | 53 |
common lymphoid progenitor | 7.68e-23 | 53 |
mature B cell | 8.28e-14 | 2 |
pre-B-II cell | 8.28e-14 | 2 |
transitional stage B cell | 8.28e-14 | 2 |
small pre-B-II cell | 8.28e-14 | 2 |
immature B cell | 8.28e-14 | 2 |
nongranular leukocyte | 1.81e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.92e-10 | 120 |
precursor B cell | 1.19e-09 | 3 |
leukocyte | 7.43e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.79e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-07 | 161 |
hematopoietic stem cell | 3.70e-07 | 168 |
hematopoietic cell | 8.67e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.10e-09 | 3 |
gastrointestinal system mesentery | 1.10e-09 | 3 |
stomach region | 1.10e-09 | 3 |
mesentery | 1.10e-09 | 3 |
gastrointestinal system serosa | 1.10e-09 | 3 |
mesentery of stomach | 1.10e-09 | 3 |
gut mesentery | 1.10e-09 | 3 |
dorsal mesentery | 1.10e-09 | 3 |
dorsal mesogastrium | 1.10e-09 | 3 |
peritoneal cavity | 1.10e-09 | 3 |
spleen primordium | 1.10e-09 | 3 |