FFCP PHASE1:Hg19::chr2:232238892..232238901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:232238892..232238901,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr2:232238892..232238901,+ | |description=CAGE_peak_at_chr2:232238892..232238901,+ | ||
|id=chr2:232238892..232238901,+ | |id=chr2:232238892..232238901,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.41e-32!3;CL:0002097!3.53e-22!2;CL:0000077!1.26e-19!19;CL:0000174!3.99e-15!3 | |ontology_enrichment_celltype=CL:0002541!1.41e-32!3;CL:0002097!3.53e-22!2;CL:0000077!1.26e-19!19;CL:0000174!3.99e-15!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.79e-88;3!CL:0002097;5.96e-34;2!CL:0000174;3.66e-23;3!CL:0000349;5.09e-15;19!CL:0000150;1.16e-08;9!CL:0000163;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.24e-88,3;CL:0002097,7.05e-34,2;CL:0000174,4.09e-23,3;CL:0000349,4.91e-15,19;CL:0000150,1.21e-08,9;CL:0000163,1.21e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:170!5.17e-08!6 | |ontology_enrichment_disease=DOID:170!5.17e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:170;2.59e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.41e-32!3;UBERON:0000920!1.41e-32!3;UBERON:0003124!1.13e-24!7;UBERON:0005631!5.52e-19!14;UBERON:0000158!5.52e-19!14;UBERON:0002369!3.99e-15!3;UBERON:0001235!3.99e-15!3;UBERON:0006858!3.99e-15!3;UBERON:0000478!4.82e-11!24 | |ontology_enrichment_uberon=UBERON:0000476!1.41e-32!3;UBERON:0000920!1.41e-32!3;UBERON:0003124!1.13e-24!7;UBERON:0005631!5.52e-19!14;UBERON:0000158!5.52e-19!14;UBERON:0002369!3.99e-15!3;UBERON:0001235!3.99e-15!3;UBERON:0006858!3.99e-15!3;UBERON:0000478!4.82e-11!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.79e-88;3!UBERON:0000920;7.79e-88;3!UBERON:0005631;2.22e-27;10!UBERON:0000158;2.22e-27;10!UBERON:0002369;3.66e-23;3!UBERON:0001235;3.66e-23;3!UBERON:0006858;3.66e-23;3!UBERON:0000478;3.86e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.24e-88,3;UBERON:0003124,1.49e-38,7;UBERON:0002369,4.09e-23,3;UBERON:0001235,4.09e-23,3;UBERON:0006858,4.09e-23,3;UBERON:0005631,5.89e-20,14;UBERON:0000158,5.89e-20,14;UBERON:0000478,3.75e-12,24 | |||
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|short_description=p@chr2:232238892..232238901,+ | |short_description=p@chr2:232238892..232238901,+ | ||
}} | }} |
Latest revision as of 07:37, 29 July 2015
Short description: | p@chr2:232238892..232238901, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:232238892..232238901, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.24e-88 | 3 |
cortical cell of adrenal gland | 7.05e-34 | 2 |
steroid hormone secreting cell | 4.09e-23 | 3 |
extraembryonic cell | 4.91e-15 | 19 |
glandular epithelial cell | 1.21e-08 | 9 |
endocrine cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.24e-88 | 3 |
chorion | 1.49e-38 | 7 |
adrenal gland | 4.09e-23 | 3 |
adrenal cortex | 4.09e-23 | 3 |
adrenal/interrenal gland | 4.09e-23 | 3 |
extraembryonic membrane | 5.89e-20 | 14 |
membranous layer | 5.89e-20 | 14 |
extraembryonic structure | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 2.74e-12 | 6 |