FFCP PHASE1:Hg19::chr2:237683212..237683239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:237683212..237683239,+ | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_at_chr2:237683212..237683239,+ | |description=CAGE_peak_at_chr2:237683212..237683239,+ | ||
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|ontology_enrichment_celltype=CL:0000349!7.44e-25!3;CL:0002577!7.44e-25!3;CL:0002541!2.44e-24!3;CL:0002536!3.87e-17!2;CL:0002537!8.33e-15!5 | |ontology_enrichment_celltype=CL:0000349!7.44e-25!3;CL:0002577!7.44e-25!3;CL:0002541!2.44e-24!3;CL:0002536!3.87e-17!2;CL:0002537!8.33e-15!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.19e-78;19!CL:0002577;9.75e-39;3!CL:0002541;6.54e-38;3!CL:0002536;2.16e-26;2!CL:0002537;5.46e-23;5 | |ontology_enrichment_celltype_v019=CL:0000349;3.19e-78;19!CL:0002577;9.75e-39;3!CL:0002541;6.54e-38;3!CL:0002536;2.16e-26;2!CL:0002537;5.46e-23;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.19e-78,19;CL:0002577,9.75e-39,3;CL:0002541,6.54e-38,3;CL:0002536,2.16e-26,2;CL:0002537,5.46e-23,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.25e-13;1 | |ontology_enrichment_development_v019=UBERON:0003124;1.25e-13;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.69e-79!14;UBERON:0000158!2.69e-79!14;UBERON:0003124!9.23e-55!7;UBERON:0000478!2.00e-45!24;UBERON:0001987!3.22e-32!4;UBERON:0004340!3.22e-32!4;UBERON:0000305!2.86e-28!7;UBERON:0004871!9.94e-25!8;UBERON:0000476!2.44e-24!3;UBERON:0000920!2.44e-24!3;UBERON:0004923!5.11e-21!57;UBERON:0000995!4.84e-13!21;UBERON:0005795!1.99e-12!22;UBERON:0003975!1.99e-12!22;UBERON:0004175!7.10e-11!25;UBERON:0003134!3.53e-07!37;UBERON:0000474!3.53e-07!37 | |ontology_enrichment_uberon=UBERON:0005631!2.69e-79!14;UBERON:0000158!2.69e-79!14;UBERON:0003124!9.23e-55!7;UBERON:0000478!2.00e-45!24;UBERON:0001987!3.22e-32!4;UBERON:0004340!3.22e-32!4;UBERON:0000305!2.86e-28!7;UBERON:0004871!9.94e-25!8;UBERON:0000476!2.44e-24!3;UBERON:0000920!2.44e-24!3;UBERON:0004923!5.11e-21!57;UBERON:0000995!4.84e-13!21;UBERON:0005795!1.99e-12!22;UBERON:0003975!1.99e-12!22;UBERON:0004175!7.10e-11!25;UBERON:0003134!3.53e-07!37;UBERON:0000474!3.53e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.37e-79;10!UBERON:0000158;9.37e-79;10!UBERON:0000478;2.39e-73;24!UBERON:0001987;1.57e-50;4!UBERON:0000305;1.35e-44;7!UBERON:0003124;6.54e-38;3!UBERON:0000920;6.54e-38;3!UBERON:0004923;2.57e-08;55!UBERON:0000077;9.74e-08;27!UBERON:0000474;5.36e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0005631;9.37e-79;10!UBERON:0000158;9.37e-79;10!UBERON:0000478;2.39e-73;24!UBERON:0001987;1.57e-50;4!UBERON:0000305;1.35e-44;7!UBERON:0003124;6.54e-38;3!UBERON:0000920;6.54e-38;3!UBERON:0004923;2.57e-08;55!UBERON:0000077;9.74e-08;27!UBERON:0000474;5.36e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.60e-126,14;UBERON:0000158,1.60e-126,14;UBERON:0003124,1.11e-86,7;UBERON:0000478,2.39e-73,24;UBERON:0001987,1.57e-50,4;UBERON:0004340,1.57e-50,4;UBERON:0000305,1.35e-44,7;UBERON:0004871,4.78e-39,8;UBERON:0000920,6.54e-38,3;UBERON:0004923,7.40e-26,66;UBERON:0000995,6.64e-15,21;UBERON:0005795,3.16e-14,22;UBERON:0003975,3.16e-14,22;UBERON:0004175,1.62e-12,25;UBERON:0003134,1.96e-08,37;UBERON:0000474,1.96e-08,37;UBERON:0003100,1.34e-07,41;UBERON:0000077,3.24e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,120.361196043725,119.750208115718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0.368738337083406,0,0,0,0,0,0,50.0160492886328,191.400755437072,146.961682558225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.4787645812426,8.61197574414652,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9001159731919,9.06816174678437,48.5061646176958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45939243634291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,120.361196043725,119.750208115718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0.368738337083406,0,0,0,0,0,0,50.0160492886328,191.400755437072,146.961682558225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.4787645812426,8.61197574414652,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9001159731919,9.06816174678437,48.5061646176958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45939243634291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:237683212..237683239,+ | |short_description=p@chr2:237683212..237683239,+ | ||
}} | }} |
Latest revision as of 08:08, 29 July 2015
Short description: | p@chr2:237683212..237683239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:237683212..237683239, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.19e-78 | 19 |
placental epithelial cell | 9.75e-39 | 3 |
chorionic membrane mesenchymal stem cell | 6.54e-38 | 3 |
amniotic epithelial cell | 2.16e-26 | 2 |
amnion mesenchymal stem cell | 5.46e-23 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.60e-126 | 14 |
membranous layer | 1.60e-126 | 14 |
chorion | 1.11e-86 | 7 |
extraembryonic structure | 2.39e-73 | 24 |
placenta | 1.57e-50 | 4 |
allantois | 1.57e-50 | 4 |
amnion | 1.35e-44 | 7 |
somatic layer of lateral plate mesoderm | 4.78e-39 | 8 |
egg chorion | 6.54e-38 | 3 |
organ component layer | 7.40e-26 | 66 |
uterus | 6.64e-15 | 21 |
embryonic uterus | 3.16e-14 | 22 |
internal female genitalia | 3.16e-14 | 22 |
internal genitalia | 1.62e-12 | 25 |
female reproductive organ | 1.96e-08 | 37 |
female reproductive system | 1.96e-08 | 37 |
female organism | 1.34e-07 | 41 |
mixed endoderm/mesoderm-derived structure | 3.24e-07 | 29 |