FFCP PHASE1:Hg19::chr2:238273001..238273016,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238273001..238273016,+ | |||
|coexpression_cluster_id=C4203 | |||
|description=CAGE_peak_at_chr2:238273001..238273016,+ | |description=CAGE_peak_at_chr2:238273001..238273016,+ | ||
|id=chr2:238273001..238273016,+ | |id=chr2:238273001..238273016,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.20e-29!75;CL:0000055!4.83e-22!180;CL:0000048!1.21e-13!430;CL:0000723!4.63e-13!436;CL:0002320!6.51e-13!365;CL:0000034!2.61e-12!444;CL:0000134!2.66e-10!358;CL:0002620!1.27e-09!23;CL:0002371!6.42e-09!591;CL:0002334!1.32e-08!12;CL:0000219!6.65e-08!390;CL:0000499!1.15e-07!27;CL:0000144!1.62e-07!625;CL:0000188!2.49e-07!9 | |ontology_enrichment_celltype=CL:0000057!1.20e-29!75;CL:0000055!4.83e-22!180;CL:0000048!1.21e-13!430;CL:0000723!4.63e-13!436;CL:0002320!6.51e-13!365;CL:0000034!2.61e-12!444;CL:0000134!2.66e-10!358;CL:0002620!1.27e-09!23;CL:0002371!6.42e-09!591;CL:0002334!1.32e-08!12;CL:0000219!6.65e-08!390;CL:0000499!1.15e-07!27;CL:0000144!1.62e-07!625;CL:0000188!2.49e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000135;6.97e-23;3!CL:0000388;6.97e-23;3!CL:0002583;3.44e-15;2!CL:0002521;1.96e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.89e-23,3;CL:0000388,3.89e-23,3;CL:0002583,4.29e-15,2;CL:0002521,1.62e-10,3;CL:0002320,5.48e-08,361;CL:0000057,7.05e-08,76;CL:0000134,2.69e-07,354;CL:0000048,8.01e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.87e-12!375;UBERON:0003102!4.45e-11!95;UBERON:0000914!1.30e-08!83;UBERON:0002329!1.30e-08!83;UBERON:0003077!1.30e-08!83;UBERON:0003059!1.30e-08!83;UBERON:0007282!1.30e-08!83;UBERON:0009618!1.30e-08!83;UBERON:0007285!1.30e-08!83;UBERON:0002199!1.31e-08!45;UBERON:0002416!1.31e-08!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;6.32e-23;5!UBERON:0007846;6.97e-23;3!UBERON:0000043;6.97e-23;3!UBERON:0007845;6.97e-23;3!UBERON:0002190;1.96e-10;3!UBERON:0003891;3.11e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.89e-23,3;UBERON:0000043,3.89e-23,3;UBERON:0007845,3.89e-23,3;UBERON:0002072,6.02e-23,5;UBERON:0002190,1.62e-10,3;UBERON:0003891,4.54e-08,4;UBERON:0002384,1.19e-07,371;UBERON:0002199,7.30e-07,46;UBERON:0002416,7.30e-07,46 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.140954404095971,0,0.893922188854576,0,0,1.89515962028049,1.04474251279935,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0.936480230490962,0,0.747243402759005,0.117434498643765,0.323745888736263,0,0.204154171254893,0.368502951935304,0.103325781175765,0,1.48360157567134,0,0.718618141816238,0.336672227908132,0.375355559615893,0,0.438977620880838,0.30648779579902,0.45071417671979,0,2.15267562826634,0.213557388818567,0.211931901159562,0.900273288253207,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0,1.06502877754984,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,1.41849132023278,0.266422179016099,1.00084595560703,0.542621605391443,0,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,2.50085260529839,0.542530047399471,0.623912584592421,0.535286966391485,0.788512075169673,0,0,0,1.03473071292505,1.99267679560631,0,0.434418072340414,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0,0,0.321707842287215,0,1.07946785661859,1.06537035187876,0.821271560138091,0.519254429183621,1.04589340613963,0,0,0,0,1.0925470080403,0.655622074797121,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16004861950546,0.462145851343933,0.307007349452259,0.275673144969061,0.322260734604821,0.725083469571143,0,1.33548053470106,0,0,0,0,0,0.94443704049192,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.818999468447914,0.848432591722276,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0.844430541190656,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.597019211547496,1.16856654923612,0,0.568209015825267,1.0062716070103,0,0.228840068396924,0.453692771289717,0,0,0,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06790534516827,1.84870251452567,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684466602170562,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,1.07050261945492,0.140954404095971,0,0.893922188854576,0,0,1.89515962028049,1.04474251279935,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0.936480230490962,0,0.747243402759005,0.117434498643765,0.323745888736263,0,0.204154171254893,0.368502951935304,0.103325781175765,0,1.48360157567134,0,0.718618141816238,0.336672227908132,0.375355559615893,0,0.438977620880838,0.30648779579902,0.45071417671979,0,2.15267562826634,0.213557388818567,0.211931901159562,0.900273288253207,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0,1.06502877754984,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,1.41849132023278,0.266422179016099,1.00084595560703,0.542621605391443,0,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,2.50085260529839,0.542530047399471,0.623912584592421,0.535286966391485,0.788512075169673,0,0,0,1.03473071292505,1.99267679560631,0,0.434418072340414,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0,0,0.321707842287215,0,1.07946785661859,1.06537035187876,0.821271560138091,0.519254429183621,1.04589340613963,0,0,0,0,1.0925470080403,0.655622074797121,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16004861950546,0.462145851343933,0.307007349452259,0.275673144969061,0.322260734604821,0.725083469571143,0,1.33548053470106,0,0,0,0,0,0.94443704049192,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.818999468447914,0.848432591722276,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0.844430541190656,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.597019211547496,1.16856654923612,0,0.568209015825267,1.0062716070103,0,0.228840068396924,0.453692771289717,0,0,0,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06790534516827,1.84870251452567,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684466602170562,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr2:238273001..238273016,+ | |short_description=p@chr2:238273001..238273016,+ | ||
}} | }} |
Latest revision as of 08:11, 29 July 2015
Short description: | p@chr2:238273001..238273016, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238273001..238273016, + |
Coexpression cluster: | C4203_tenocyte_Hair_Nucleus_Smooth_Fibroblast_normal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.89e-23 | 3 |
tendon cell | 3.89e-23 | 3 |
subcutaneous preadipocyte | 4.29e-15 | 2 |
subcutaneous fat cell | 1.62e-10 | 3 |
connective tissue cell | 5.48e-08 | 361 |
fibroblast | 7.05e-08 | 76 |
mesenchymal cell | 2.69e-07 | 354 |
multi fate stem cell | 8.01e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.89e-23 | 3 |
tendon | 3.89e-23 | 3 |
regular connective tissue | 3.89e-23 | 3 |
hypodermis | 6.02e-23 | 5 |
subcutaneous adipose tissue | 1.62e-10 | 3 |
stroma | 4.54e-08 | 4 |
connective tissue | 1.19e-07 | 371 |
integument | 7.30e-07 | 46 |
integumental system | 7.30e-07 | 46 |