FFCP PHASE1:Hg19::chr2:28340333..28340358,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:28340333..28340358,+ | |||
|coexpression_cluster_id=C228 | |coexpression_cluster_id=C228 | ||
|description=CAGE_peak_at_chr2:28340333..28340358,+ | |description=CAGE_peak_at_chr2:28340333..28340358,+ | ||
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|ontology_enrichment_celltype=CL:0002563!6.90e-33!4;CL:0002253!1.44e-29!2;CL:0000223!2.03e-08!59;CL:0002251!9.49e-07!21 | |ontology_enrichment_celltype=CL:0002563!6.90e-33!4;CL:0002253!1.44e-29!2;CL:0000223!2.03e-08!59;CL:0002251!9.49e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002563;4.00e-50;4!CL:0002253;4.32e-26;2!CL:0002231;8.00e-18;3!CL:0002076;4.80e-12;42!CL:0002251;5.42e-11;20 | |ontology_enrichment_celltype_v019=CL:0002563;4.00e-50;4!CL:0002253;4.32e-26;2!CL:0002231;8.00e-18;3!CL:0002076;4.80e-12;42!CL:0002251;5.42e-11;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.00e-50,4;CL:0002253,4.32e-26,2;CL:0002231,8.00e-18,3;CL:0002076,1.56e-11,42;CL:0002251,5.42e-11,20;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.17e-07;31 | |ontology_enrichment_development_v019=UBERON:0003104;1.17e-07;31 | ||
|ontology_enrichment_disease=DOID:3493!2.67e-08!2 | |ontology_enrichment_disease=DOID:3493!2.67e-08!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!6.90e-33!4;UBERON:0001262!6.90e-33!4;UBERON:0004786!6.90e-33!4;UBERON:0004808!6.90e-33!4;UBERON:0001277!6.90e-33!4;UBERON:0003350!1.81e-26!5;UBERON:0000060!2.44e-19!12;UBERON:0002146!1.78e-15!1;UBERON:0005623!1.78e-15!1;UBERON:0001052!2.56e-15!4;UBERON:0000485!5.15e-15!9;UBERON:0004907!1.89e-12!5;UBERON:0000344!2.05e-11!12;UBERON:0003929!3.16e-09!54;UBERON:0005172!5.14e-09!55;UBERON:0005173!5.14e-09!55;UBERON:0002113!8.76e-09!27;UBERON:0003918!8.76e-09!27;UBERON:0005095!8.76e-09!27;UBERON:0007687!8.76e-09!27;UBERON:0006554!3.67e-08!44;UBERON:0002417!4.25e-08!61;UBERON:0000916!4.25e-08!61;UBERON:0001008!5.60e-08!45;UBERON:0000489!1.91e-07!32;UBERON:0001046!2.04e-07!19;UBERON:0001155!2.60e-07!9 | |ontology_enrichment_uberon=UBERON:0001242!6.90e-33!4;UBERON:0001262!6.90e-33!4;UBERON:0004786!6.90e-33!4;UBERON:0004808!6.90e-33!4;UBERON:0001277!6.90e-33!4;UBERON:0003350!1.81e-26!5;UBERON:0000060!2.44e-19!12;UBERON:0002146!1.78e-15!1;UBERON:0005623!1.78e-15!1;UBERON:0001052!2.56e-15!4;UBERON:0000485!5.15e-15!9;UBERON:0004907!1.89e-12!5;UBERON:0000344!2.05e-11!12;UBERON:0003929!3.16e-09!54;UBERON:0005172!5.14e-09!55;UBERON:0005173!5.14e-09!55;UBERON:0002113!8.76e-09!27;UBERON:0003918!8.76e-09!27;UBERON:0005095!8.76e-09!27;UBERON:0007687!8.76e-09!27;UBERON:0006554!3.67e-08!44;UBERON:0002417!4.25e-08!61;UBERON:0000916!4.25e-08!61;UBERON:0001008!5.60e-08!45;UBERON:0000489!1.91e-07!32;UBERON:0001046!2.04e-07!19;UBERON:0001155!2.60e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;4.00e-50;4!UBERON:0001262;4.00e-50;4!UBERON:0004786;4.00e-50;4!UBERON:0004808;4.00e-50;4!UBERON:0001277;4.00e-50;4!UBERON:0000485;3.16e-29;7!UBERON:0003929;3.16e-29;7!UBERON:0003350;9.81e-26;8!UBERON:0001052;8.82e-14;4!UBERON:0000160;4.31e-12;17!UBERON:0004907;2.66e-11;5!UBERON:0000344;5.42e-11;20!UBERON:0005409;1.07e-09;22!UBERON:0004921;3.47e-07;33!UBERON:0001155;7.48e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001242;4.00e-50;4!UBERON:0001262;4.00e-50;4!UBERON:0004786;4.00e-50;4!UBERON:0004808;4.00e-50;4!UBERON:0001277;4.00e-50;4!UBERON:0000485;3.16e-29;7!UBERON:0003929;3.16e-29;7!UBERON:0003350;9.81e-26;8!UBERON:0001052;8.82e-14;4!UBERON:0000160;4.31e-12;17!UBERON:0004907;2.66e-11;5!UBERON:0000344;5.42e-11;20!UBERON:0005409;1.07e-09;22!UBERON:0004921;3.47e-07;33!UBERON:0001155;7.48e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.00e-50,4;UBERON:0001262,4.00e-50,4;UBERON:0004786,4.00e-50,4;UBERON:0004808,4.00e-50,4;UBERON:0001277,4.00e-50,4;UBERON:0003350,9.81e-26,8;UBERON:0000485,5.13e-23,9;UBERON:0001052,8.82e-14,4;UBERON:0000160,4.31e-12,17;UBERON:0001046,1.55e-11,19;UBERON:0004907,2.66e-11,5;UBERON:0000344,5.42e-11,20;UBERON:0003929,3.61e-09,54;UBERON:0005409,1.07e-08,25;UBERON:0001155,7.48e-07,9 | |||
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|short_description=p@chr2:28340333..28340358,+ | |short_description=p@chr2:28340333..28340358,+ | ||
}} | }} |
Latest revision as of 09:18, 29 July 2015
Short description: | p@chr2:28340333..28340358, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:28340333..28340358, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.00e-50 | 4 |
epithelial cell of large intestine | 4.32e-26 | 2 |
epithelial cell of prostate | 8.00e-18 | 3 |
endo-epithelial cell | 1.56e-11 | 42 |
epithelial cell of alimentary canal | 5.42e-11 | 20 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 4.00e-50 | 4 |
wall of intestine | 4.00e-50 | 4 |
gastrointestinal system mucosa | 4.00e-50 | 4 |
gastrointestinal system epithelium | 4.00e-50 | 4 |
intestinal epithelium | 4.00e-50 | 4 |
epithelium of mucosa | 9.81e-26 | 8 |
simple columnar epithelium | 5.13e-23 | 9 |
rectum | 8.82e-14 | 4 |
intestine | 4.31e-12 | 17 |
hindgut | 1.55e-11 | 19 |
lower digestive tract | 2.66e-11 | 5 |
mucosa | 5.42e-11 | 20 |
gut epithelium | 3.61e-09 | 54 |
gastrointestinal system | 1.07e-08 | 25 |
colon | 7.48e-07 | 9 |