FFCP PHASE1:Hg19::chr2:3487019..3487031,-: Difference between revisions
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|id=chr2:3487019..3487031,-
|short_description=p@chr2:3487019..3487031,-
|description=CAGE_peak_at_chr2:3487019..3487031,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:3487019..3487031,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr2:3487019..3487031,- | |||
|id=chr2:3487019..3487031,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;7.41e-19;4!CL:0002535;1.43e-10;2!CL:0002253;2.72e-10;2!CL:1000415;2.72e-10;2!CL:0002231;2.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.77e-19,4;CL:0002535,1.43e-10,2;CL:1000415,2.07e-10,2;CL:0002253,2.99e-10,2;CL:0002231,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.79e-07;3!UBERON:0006215;2.79e-07;3!UBERON:0003057;2.79e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.72e-10;2!DOID:4236;1.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.89e-10,2;DOID:4236,1.89e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.00e-26!57;UBERON:0005068!2.00e-26!57;UBERON:0006241!2.00e-26!57;UBERON:0007135!2.00e-26!57;UBERON:0007023!1.83e-23!115;UBERON:0002616!2.02e-23!59;UBERON:0003075!2.35e-20!86;UBERON:0007284!2.35e-20!86;UBERON:0002346!5.67e-19!90;UBERON:0005743!7.28e-19!86;UBERON:0003080!1.08e-18!42;UBERON:0002791!1.61e-18!33;UBERON:0000955!2.64e-18!69;UBERON:0006238!2.64e-18!69;UBERON:0002020!5.66e-18!34;UBERON:0003528!5.66e-18!34;UBERON:0001893!8.12e-18!34;UBERON:0001017!9.30e-18!82;UBERON:0001869!1.94e-17!32;UBERON:0002619!2.14e-17!22;UBERON:0002780!2.40e-17!41;UBERON:0001890!2.40e-17!41;UBERON:0006240!2.40e-17!41;UBERON:0000073!3.18e-17!94;UBERON:0001016!3.18e-17!94;UBERON:0000956!9.38e-17!25;UBERON:0000203!9.38e-17!25;UBERON:0001950!1.16e-14!20;UBERON:0003056!2.86e-14!61;UBERON:0000153!1.26e-10!129;UBERON:0007811!1.26e-10!129;UBERON:0000033!4.16e-10!123;UBERON:0000119!5.74e-10!312;UBERON:0000483!1.02e-09!309;UBERON:0003076!6.07e-09!15;UBERON:0003057!6.07e-09!15;UBERON:0000481!6.11e-09!347;UBERON:0000062!1.02e-08!511;UBERON:0000025!6.34e-08!194;UBERON:0004121!1.28e-07!169;UBERON:0000477!1.66e-07!286;UBERON:0000924!3.18e-07!173;UBERON:0006601!3.18e-07!173;UBERON:0000064!3.89e-07!219;UBERON:0000922!4.03e-07!612;UBERON:0004733!4.31e-07!12;UBERON:0002028!4.31e-07!12;UBERON:0007277!4.31e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;7.41e-19;4!UBERON:0001262;7.41e-19;4!UBERON:0004786;7.41e-19;4!UBERON:0004808;7.41e-19;4!UBERON:0001277;7.41e-19;4!UBERON:0000485;3.30e-11;7!UBERON:0003929;3.30e-11;7!UBERON:0006955;1.43e-10;2!UBERON:0004801;1.43e-10;2!UBERON:0001875;2.72e-10;2!UBERON:0006514;2.72e-10;2!UBERON:0003350;6.34e-10;8!UBERON:0002240;2.79e-07;3!UBERON:0002110;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001137;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,6.77e-19,4;UBERON:0001262,6.77e-19,4;UBERON:0004786,6.77e-19,4;UBERON:0004808,6.77e-19,4;UBERON:0001277,6.77e-19,4;UBERON:0006955,1.43e-10,2;UBERON:0004801,1.43e-10,2;UBERON:0001875,3.58e-10,2;UBERON:0006514,3.58e-10,2;UBERON:0003350,6.06e-10,8;UBERON:0000485,6.11e-09,9;UBERON:0002110,2.32e-07,3;UBERON:0006242,2.32e-07,3;UBERON:0002240,3.16e-07,3;UBERON:0005174,3.16e-07,3;UBERON:0001137,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,2.77976734060731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.823611089208164,0.235624804691373,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,10.8331081577339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0.508507300585533,0,0,0,2.08349993919951,0,0.120596438625408,1.52581736317083,0.663475559587348,0.591095237907095,0.438770794307945,0,0,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.50648636764703,1.95551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,1.56596575179127,0,0,0.489473409012935,0,0,0,0,0,0.337884881306145,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.82046545696302,0.252071696221718,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0.443568258651136,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.203909198930495,0.263091094251396,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0.101988829741982,2.13773924212448,0.459474497674225,0,0.606229585745915,0.267964130156178,0,0.620597975171371,0.213233981900981,0,0,0.124149428591716,0.224263725161227,0.318235791390825,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,2.77976734060731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.823611089208164,0.235624804691373,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,10.8331081577339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0.508507300585533,0,0,0,2.08349993919951,0,0.120596438625408,1.52581736317083,0.663475559587348,0.591095237907095,0.438770794307945,0,0,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.50648636764703,1.95551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,1.56596575179127,0,0,0.489473409012935,0,0,0,0,0,0.337884881306145,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.82046545696302,0.252071696221718,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0.443568258651136,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.203909198930495,0.263091094251396,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0.101988829741982,2.13773924212448,0.459474497674225,0,0.606229585745915,0.267964130156178,0,0.620597975171371,0.213233981900981,0,0,0.124149428591716,0.224263725161227,0.318235791390825,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr2:3487019..3487031,- | |||
}} | }} |
Latest revision as of 09:43, 29 July 2015
Short description: | p@chr2:3487019..3487031, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:3487019..3487031, - |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.77e-19 | 4 |
epithelial cell of cervix | 1.43e-10 | 2 |
epithelial cell of gall bladder | 2.07e-10 | 2 |
epithelial cell of large intestine | 2.99e-10 | 2 |
epithelial cell of prostate | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 6.77e-19 | 4 |
wall of intestine | 6.77e-19 | 4 |
gastrointestinal system mucosa | 6.77e-19 | 4 |
gastrointestinal system epithelium | 6.77e-19 | 4 |
intestinal epithelium | 6.77e-19 | 4 |
uterine epithelium | 1.43e-10 | 2 |
cervix epithelium | 1.43e-10 | 2 |
globus pallidus | 3.58e-10 | 2 |
pallidum | 3.58e-10 | 2 |
epithelium of mucosa | 6.06e-10 | 8 |
simple columnar epithelium | 6.11e-09 | 9 |
gallbladder | 2.32e-07 | 3 |
gall bladder primordium | 2.32e-07 | 3 |
spinal cord | 3.16e-07 | 3 |
dorsal region element | 3.16e-07 | 3 |
dorsum | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.89e-10 | 2 |
carcinosarcoma | 1.89e-10 | 2 |