FFCP PHASE1:Hg19::chr2:38775387..38775391,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:38775387..38775391,- | |||
|description=CAGE_peak_at_chr2:38775387..38775391,- | |description=CAGE_peak_at_chr2:38775387..38775391,- | ||
|id=chr2:38775387..38775391,- | |id=chr2:38775387..38775391,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.02e-12!235;DOID:14566!1.70e-12!239;DOID:0050687!5.76e-12!143;DOID:0050686!2.14e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:171;5.83e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.65e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001869!9.54e-08!32;UBERON:0000073!2.76e-07!94;UBERON:0001016!2.76e-07!94;UBERON:0001893!3.70e-07!34;UBERON:0002020!3.89e-07!34;UBERON:0003528!3.89e-07!34;UBERON:0002791!4.97e-07!33;UBERON:0000956!7.21e-07!25;UBERON:0000203!7.21e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;5.85e-15;5!UBERON:0002619;3.82e-14;22!UBERON:0000956;2.52e-12;25!UBERON:0000203;2.52e-12;25!UBERON:0002346;9.45e-11;4!UBERON:0000923;9.45e-11;4!UBERON:0010316;9.45e-11;4!UBERON:0005291;9.45e-11;4!UBERON:0001954;3.09e-10;2!UBERON:0003022;3.09e-10;2!UBERON:0002421;3.09e-10;2!UBERON:0002600;3.09e-10;2!UBERON:0001876;3.62e-10;2!UBERON:0001950;2.00e-09;20!UBERON:0002050;1.10e-08;5!UBERON:0005423;1.10e-08;5!UBERON:0002791;5.86e-08;32!UBERON:0001869;6.70e-08;32!UBERON:0003528;9.04e-08;34!UBERON:0002020;9.04e-08;34!UBERON:0001893;2.21e-07;34!UBERON:0002110;9.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,1.60e-15,5;UBERON:0002619,2.60e-14,22;UBERON:0000956,1.80e-12,25;UBERON:0000203,1.80e-12,25;UBERON:0001954,1.33e-10,2;UBERON:0003022,1.33e-10,2;UBERON:0002421,1.33e-10,2;UBERON:0002600,1.33e-10,2;UBERON:0001876,1.61e-10,2;UBERON:0002791,1.75e-09,32;UBERON:0001869,1.75e-09,32;UBERON:0001950,1.86e-09,20;UBERON:0003528,7.51e-09,34;UBERON:0002020,7.51e-09,34;UBERON:0001893,7.51e-09,34;UBERON:0002346,3.85e-08,86;UBERON:0002780,4.09e-07,41;UBERON:0001890,4.09e-07,41;UBERON:0003080,4.09e-07,41;UBERON:0006240,4.09e-07,41;UBERON:0002110,5.18e-07,3;UBERON:0006242,5.18e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.447830948479849,0,0.515151135268373,0.290796477559129,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0.918251677112708,0,0,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.445641827540694,0,0,0.270803863765016,1.79327847615945,1.69077151827842,0.657751618414705,0.276350017785848,0.289803085735052,0,0,0,0.906474741580529,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0.950452044448374,0.150575119077773,0.511946444617674,1.24930726552346,0.710331756132051,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0.189069634328136,0.886917589850256,0.790513071238134,0.261958150995425,0,0,1.62273696827342,0.870648686496336,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.506522046658319,0.794455084879313,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,0,0,0,0.103052529238439,0.515281080091258,0,0,0.194874010322397,0.504867548488229,0,0.80823028409406,0.710019185033229,0.10075209822764,0.169560592310488,0,0.818238361772504,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,1.32438929824395,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0,0.985326475791887,1.40877494421162,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.857479297891735,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.399891964728228,0,1.00451418286425,0,0,0,0,0.144781306667579,0.205476322550383,0.895304816199478,0.112085143993527,0,0.215627574859517,0.513372145118994,0.254094624222463,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0,0.473107245101804,0.234282829985426,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.321707842287215,0,0,0,0.246381468041427,0,0.116210378459959,0.604297247958111,0.200506470303285,0.276242966807689,0,0,0.655622074797121,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.206082023295445,0.457847324091717,0.660075999364704,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.322260734604821,0.290033387828457,0,0.356128142586949,0.330569830721956,0,0.638063562472921,0.30347334256665,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,1.13929437434833,0.476463550915578,0.411362273086194,0.648473311192717,0,0.79312517629427,0.854592569019785,1.92495971052672,0.245040215981032,0,0,0.142283686696828,0,0,0,0.423347165447766,0,0,0.228234679033192,0.313359791546046,2.50634477090067,0.50787533340481,0.802940375518498,0.201799707191048,0,2.06103206853459,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0.334330152832435,0.852408440419239,0,0,0,2.98244294329889,1.82870241333667,0,0.988823245360557,4.01138275443188,0.796991953004279,0,0,0.715880777515084,1.23084805461069,0,0.269605053441981,0.358042349351218,1.53471711068062,0,0,0,0,0.556608588971108,0,0.520855522170466,0.174919999992391,0,0.1137934482855,1.27126825146383,0,0.344743373241465,2.62444152044929,0.173624994933292,0.885741385813839,0.60298219312704,0,0.442317039724898,1.18219047581419,0.438770794307945,0.10893846351899,0.278847488557207,0.153900517007594,0,0,0.0897576444097721,0.325942115766024,0,0,0,0,0,0.831058409500782,0,0,0,0.75901493089674,0.317873157960757,0.210998064528027,0.816164040795739,0.706765357169704,0.865554558968364,0.995261931078505,0.176915129006678,0,0.593042257361244,0.617819694732514,0.313265848516366,0.134802265961354,0.802577647298789,0.234264445725339,0,0.19566461893209,0.485560759068186,0,0,0.30607276163049,1.0741718536843,0,0.103688191397247,0,0.330991955875499,0.627865836814451,1.19472429772959,0.853828638089378,0.970722711091971,0.347119476670262,0.587954384486266,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0,0,0,0.529536760149002,0,0.274083849293502,0.397429223405979,0.759729551470544,1.56441106187842,0.240476460754601,1.70762395791482,0.19980960958213,0.14409041715410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| ||
|short_description=p@chr2:38775387..38775391,- | |short_description=p@chr2:38775387..38775391,- | ||
}} | }} |
Latest revision as of 09:59, 29 July 2015
Short description: | p@chr2:38775387..38775391, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:38775387..38775391, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
limbic system | 1.60e-15 | 5 |
regional part of cerebral cortex | 2.60e-14 | 22 |
cerebral cortex | 1.80e-12 | 25 |
pallium | 1.80e-12 | 25 |
Ammon's horn | 1.33e-10 | 2 |
lobe parts of cerebral cortex | 1.33e-10 | 2 |
hippocampal formation | 1.33e-10 | 2 |
limbic lobe | 1.33e-10 | 2 |
amygdala | 1.61e-10 | 2 |
regional part of telencephalon | 1.75e-09 | 32 |
cerebral hemisphere | 1.75e-09 | 32 |
neocortex | 1.86e-09 | 20 |
brain grey matter | 7.51e-09 | 34 |
gray matter | 7.51e-09 | 34 |
telencephalon | 7.51e-09 | 34 |
neurectoderm | 3.85e-08 | 86 |
regional part of forebrain | 4.09e-07 | 41 |
forebrain | 4.09e-07 | 41 |
anterior neural tube | 4.09e-07 | 41 |
future forebrain | 4.09e-07 | 41 |
gallbladder | 5.18e-07 | 3 |
gall bladder primordium | 5.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.65e-11 | 10 |