FFCP PHASE1:Hg19::chr2:43454308..43454313,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:43454308..43454313,- to FFCP PHASE1:Hg19::chr2:43454308..43454313,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:43454308..43454313,- | |||
|description=CAGE_peak_at_chr2:43454308..43454313,- | |||
|id=chr2:43454308..43454313,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.13e-18;3!CL:0002327;2.94e-14;4!CL:0000624;8.10e-10;6!CL:0002363;5.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.53e-18,3;CL:0000825,2.53e-18,3;CL:0002327,1.85e-14,4;CL:0000624,9.68e-10,6;CL:0002363,7.03e-08,2;CL:0000008,7.03e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.22e-14;1!CL:0000008;5.74e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.94e-14;4!UBERON:0003566;5.74e-08;2!UBERON:0001777;5.74e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000076,8.56e-16,8;UBERON:0001911,1.85e-14,4;UBERON:0005333,1.85e-14,4;UBERON:0008425,1.85e-14,4;UBERON:0005311,1.85e-14,4;UBERON:0003566,7.03e-08,2;UBERON:0001777,7.03e-08,2;UBERON:0005085,3.59e-07,31 | |||
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| ||
|short_description=p@chr2:43454308..43454313,- | |||
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Latest revision as of 10:17, 29 July 2015
Short description: | p@chr2:43454308..43454313, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43454308..43454313, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.53e-18 | 3 |
pro-NK cell | 2.53e-18 | 3 |
mammary gland epithelial cell | 1.85e-14 | 4 |
CD4-positive, alpha-beta T cell | 9.68e-10 | 6 |
keratocyte | 7.03e-08 | 2 |
migratory cranial neural crest cell | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
external ectoderm | 8.56e-16 | 8 |
mammary gland | 1.85e-14 | 4 |
mammary bud | 1.85e-14 | 4 |
mammary ridge | 1.85e-14 | 4 |
mammary placode | 1.85e-14 | 4 |
head connective tissue | 7.03e-08 | 2 |
substantia propria of cornea | 7.03e-08 | 2 |
ectodermal placode | 3.59e-07 | 31 |