FFCP PHASE1:Hg19::chr2:71133675..71133679,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:71133675..71133679,+ | |||
|description=CAGE_peak_at_chr2:71133675..71133679,+ | |description=CAGE_peak_at_chr2:71133675..71133679,+ | ||
|id=chr2:71133675..71133679,+ | |id=chr2:71133675..71133679,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.35e-07!180 | |ontology_enrichment_celltype=CL:0000055!2.35e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.22e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.95e-09;3 | |||
|ontology_enrichment_disease=DOID:0050687!1.61e-17!143;DOID:162!3.43e-12!235;DOID:14566!9.80e-12!239;DOID:3095!8.22e-10!22;DOID:2994!8.22e-10!22;DOID:305!6.41e-08!106;DOID:171!8.46e-08!10 | |ontology_enrichment_disease=DOID:0050687!1.61e-17!143;DOID:162!3.43e-12!235;DOID:14566!9.80e-12!239;DOID:3095!8.22e-10!22;DOID:2994!8.22e-10!22;DOID:305!6.41e-08!106;DOID:171!8.46e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:171;4.54e-21;10!DOID:3095;1.65e-12;22!DOID:2994;1.65e-12;22!DOID:169;1.44e-09;6!DOID:3119;2.34e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.43e-21,10;DOID:0050687,1.37e-14,143;DOID:3095,1.33e-12,22;DOID:2994,1.33e-12,22;DOID:162,3.59e-10,235;DOID:14566,7.36e-10,239;DOID:169,9.54e-10,6;DOID:3119,2.53e-07,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.30e-14;4!UBERON:0000923;4.30e-14;4!UBERON:0010316;4.30e-14;4!UBERON:0005291;4.30e-14;4!UBERON:0000013;2.22e-11;5!UBERON:0002410;2.22e-11;5!UBERON:0002050;2.22e-11;5!UBERON:0005423;2.22e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.34e-11,5;UBERON:0002410,1.34e-11,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.85870796139317,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.661743720148475,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0.653847612453835,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0,0.323745888736263,0.702254033511242,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.412210116953756,0.772921620136887,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.368199594569197,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,1.507095264676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571481048629521,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,1.31205858279882,0.650756789328606,0.309123034943167,1.00726411300178,1.23764249880882,0,0,0,0,0.308097234229289,0.614014698904518,0.275673144969061,0.214840489736547,0,0.255679882248303,0.890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0,0,0,0.563391205064483,0,0.0982490410131212,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.614481528616916,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0,0.36408156524854,0,0.568272293612826,0,0,0,0,0.281338832821026,0.445234820091624,0.329607748453519,1.05562704063997,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.910347586283997,0,0.472775363535873,2.41320361269025,0.874813840149763,2.43074992906609,0,0,1.52581736317083,1.21637185924347,0,0,0,0.278847488557207,0.0769502585037971,0,0,0.718061155278177,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0.282706142867882,1.08194319871046,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0.300646838828985,1.14057010536972,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0.138674673013139,0.173559738335131,0,0.435296032902013,0,0.171986032471617,0,0,0,0,0.353024506766001,2.03382666702479,0,0.19871461170299,0.0633107959558787,0.391102765469606,0,0,0,0.288180834308212,2.29073192331831,0.514784993585894,0,1.36677789121976,0,0.407712618220842,0.104602846312333,0.611989305817931,0,0,0.136905378891993,0,0.429765441419957,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0,0,0,2.36349546921671,2.14281231791033,3.63979136812598,0.590564889088493,0,0,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0.35857467866569,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.511164065356265,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0.110929051536852,0,0,0.37494122388632,0.454947352624943,1.7127920012698,0,0,2.17381542916238,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0.363697318405119,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.578742114812744,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0.327609848846413,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,1.66262682694747,0.107824811396682,1.25812753484717,1.96577348745625,1.69732529954025,0.637724760305049,1.23935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0.80682027481408,0,0,0,0,0,0.781078098613847,0,0,0,0,0,1.05522746615772,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0.131545547125698,0.236387681767936,0,0,0,0,0,0,0.47775168788705,0.285906176706625,1.58013611732727,0.464965701472501,3.12944890144643,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0.647428837187895,0,0,0,1.87151570769685,0,0.951360726220549,0,0.659643100472575,0.905777061400041,0.0771741581079447,0.218559560503957,2.35158648180761,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0.160482733378337,0,0,0,1.73548718412503,0.0679914901909147,0,0,0,0.462175628631418,0,0.883164973845552,0.546327859818478,1.64708051314868,0,0.26721740526556,0.0918948995348449,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0.665320713092027,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.85870796139317,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.661743720148475,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0.653847612453835,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0,0.323745888736263,0.702254033511242,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.412210116953756,0.772921620136887,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.368199594569197,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,1.507095264676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571481048629521,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,1.31205858279882,0.650756789328606,0.309123034943167,1.00726411300178,1.23764249880882,0,0,0,0,0.308097234229289,0.614014698904518,0.275673144969061,0.214840489736547,0,0.255679882248303,0.890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0,0,0,0.563391205064483,0,0.0982490410131212,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.614481528616916,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0,0.36408156524854,0,0.568272293612826,0,0,0,0,0.281338832821026,0.445234820091624,0.329607748453519,1.05562704063997,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.910347586283997,0,0.472775363535873,2.41320361269025,0.874813840149763,2.43074992906609,0,0,1.52581736317083,1.21637185924347,0,0,0,0.278847488557207,0.0769502585037971,0,0,0.718061155278177,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0.282706142867882,1.08194319871046,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0.300646838828985,1.14057010536972,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0.138674673013139,0.173559738335131,0,0.435296032902013,0,0.171986032471617,0,0,0,0,0.353024506766001,2.03382666702479,0,0.19871461170299,0.0633107959558787,0.391102765469606,0,0,0,0.288180834308212,2.29073192331831,0.514784993585894,0,1.36677789121976,0,0.407712618220842,0.104602846312333,0.611989305817931,0,0,0.136905378891993,0,0.429765441419957,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0,0,0,2.36349546921671,2.14281231791033,3.63979136812598,0.590564889088493,0,0,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0.35857467866569,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.511164065356265,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0.110929051536852,0,0,0.37494122388632,0.454947352624943,1.7127920012698,0,0,2.17381542916238,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0.363697318405119,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.578742114812744,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0.327609848846413,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,1.66262682694747,0.107824811396682,1.25812753484717,1.96577348745625,1.69732529954025,0.637724760305049,1.23935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0.80682027481408,0,0,0,0,0,0.781078098613847,0,0,0,0,0,1.05522746615772,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0.131545547125698,0.236387681767936,0,0,0,0,0,0,0.47775168788705,0.285906176706625,1.58013611732727,0.464965701472501,3.12944890144643,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0.647428837187895,0,0,0,1.87151570769685,0,0.951360726220549,0,0.659643100472575,0.905777061400041,0.0771741581079447,0.218559560503957,2.35158648180761,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0.160482733378337,0,0,0,1.73548718412503,0.0679914901909147,0,0,0,0.462175628631418,0,0.883164973845552,0.546327859818478,1.64708051314868,0,0.26721740526556,0.0918948995348449,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0.665320713092027,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr2:71133675..71133679,+ | |short_description=p@chr2:71133675..71133679,+ | ||
}} | }} |
Latest revision as of 11:59, 29 July 2015
Short description: | p@chr2:71133675..71133679, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:71133675..71133679, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.34e-11 | 5 |
autonomic nervous system | 1.34e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.43e-21 | 10 |
cell type cancer | 1.37e-14 | 143 |
germ cell and embryonal cancer | 1.33e-12 | 22 |
germ cell cancer | 1.33e-12 | 22 |
cancer | 3.59e-10 | 235 |
disease of cellular proliferation | 7.36e-10 | 239 |
neuroendocrine tumor | 9.54e-10 | 6 |
gastrointestinal system cancer | 2.53e-07 | 14 |