FFCP PHASE1:Hg19::chr2:75114636..75114643,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:75114636..75114643,- | |||
|description=CAGE_peak_at_chr2:75114636..75114643,- | |||
|id=chr2:75114636..75114643,- | |||
|ontology_enrichment_celltype=CL:0000068!1.55e-21!3;CL:0000069!1.55e-21!3;CL:0000307!1.55e-21!3;CL:0000377!1.55e-21!3;CL:0002202!2.65e-19!9;CL:0002632!2.65e-19!9;CL:0002368!7.03e-19!13;CL:0002076!1.02e-11!43;CL:0002328!2.36e-10!3;CL:0002242!1.22e-08!1;CL:0000228!1.22e-08!1;CL:0002372!1.22e-08!1;CL:1001319!2.17e-08!1;CL:1000600!2.17e-08!1;CL:0000223!3.68e-08!59;CL:0000066!4.96e-08!254;CL:0002336!7.16e-08!1;CL:0002261!7.16e-08!1;CL:0002170!7.16e-08!1;CL:0002327!7.44e-08!4;CL:0000076!1.01e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.81e-40;1!CL:0002372;1.81e-40;1!CL:0002535;5.15e-21;2!CL:0000307;1.71e-14;3!CL:0000056;3.26e-11;4!CL:0000737;3.26e-11;4!CL:0000680;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.21e-40,1;CL:0002372,2.21e-40,1;CL:0002535,4.66e-21,2;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3;CL:0000737,3.42e-11,4;CL:0000515,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.11e-21;2!UBERON:0010056;3.11e-21;2!CL:0000377;1.71e-14;3!CL:0000515;3.26e-11;4 | |||
|ontology_enrichment_disease=DOID:1749!5.85e-24!14;DOID:0060085!1.88e-08!1;DOID:3165!1.88e-08!1;DOID:0060121!1.88e-08!1;DOID:2438!1.88e-08!1;DOID:4418!1.88e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.45e-26;14!DOID:4362;3.10e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.90e-26,14;DOID:4362,2.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003729!3.88e-13!5;UBERON:0007196!2.36e-12!14;UBERON:0001558!2.36e-12!14;UBERON:0004815!2.36e-10!3;UBERON:0002031!2.36e-10!3;UBERON:0003126!1.53e-09!7;UBERON:0001005!1.53e-09!7;UBERON:0000344!1.65e-09!12;UBERON:0004645!2.17e-08!1;UBERON:0001256!2.17e-08!1;UBERON:0001259!2.17e-08!1;UBERON:0003343!3.97e-08!4;UBERON:0004785!3.97e-08!4;UBERON:0002185!5.64e-08!4;UBERON:0000997!6.24e-08!1;UBERON:0005056!6.24e-08!1;UBERON:0001911!7.44e-08!4;UBERON:0005333!7.44e-08!4;UBERON:0008425!7.44e-08!4;UBERON:0005311!7.44e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.15e-21;2!UBERON:0004801;5.15e-21;2!UBERON:0001723;1.22e-14;3!UBERON:0001033;1.22e-14;3!UBERON:0003343;2.53e-11;4!UBERON:0004785;2.53e-11;4!UBERON:0000974;5.54e-08;6!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.66e-21,2;UBERON:0004801,4.66e-21,2;UBERON:0001723,1.22e-14,3;UBERON:0001033,1.22e-14,3;UBERON:0010056,1.22e-14,3;UBERON:0003343,2.53e-11,4;UBERON:0004785,2.53e-11,4;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,1.56706571844725,0,0,0,0,0,0,0,0,0.137041924646751,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,2.4260389891571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:75114636..75114643,- | |||
}} |
Latest revision as of 12:24, 29 July 2015
Short description: | p@chr2:75114636..75114643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:75114636..75114643, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.21e-40 | 1 |
myotube | 2.21e-40 | 1 |
epithelial cell of cervix | 4.66e-21 | 2 |
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
striated muscle cell | 3.42e-11 | 4 |
skeletal muscle myoblast | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.66e-21 | 2 |
cervix epithelium | 4.66e-21 | 2 |
tongue | 1.22e-14 | 3 |
gustatory system | 1.22e-14 | 3 |
future tongue | 1.22e-14 | 3 |
mucosa of oral region | 2.53e-11 | 4 |
respiratory system mucosa | 2.53e-11 | 4 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.90e-26 | 14 |
cervical cancer | 2.97e-09 | 5 |