FFCP PHASE1:Hg19::chr2:89157015..89157033,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=160bp_to_AJ294735_5end | |association_with_transcript=160bp_to_AJ294735_5end | ||
|cluster_id=chr2:89157015..89157033,- | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_5_at_AJ294735_5end | |description=CAGE_peak_5_at_AJ294735_5end | ||
|id=chr2:89157015..89157033,- | |id=chr2:89157015..89157033,- | ||
|ontology_enrichment_celltype=CL:0000236!6.69e-25!14;CL:0000945!3.29e-24!24;CL:0000826!3.29e-24!24;CL:0000838!3.66e-10!52;CL:0000542!6.82e-10!53;CL:0000051!6.82e-10!53;CL:0000784!8.21e-08!3 | |ontology_enrichment_celltype=CL:0000236!6.69e-25!14;CL:0000945!3.29e-24!24;CL:0000826!3.29e-24!24;CL:0000838!3.66e-10!52;CL:0000542!6.82e-10!53;CL:0000051!6.82e-10!53;CL:0000784!8.21e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.32e-27;13!CL:0000945;2.80e-25;24!CL:0000542;1.62e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.38e-31,14;CL:0000945,3.06e-25,24;CL:0000826,3.06e-25,24;CL:0000838,2.46e-10,52;CL:0000542,4.28e-10,53;CL:0000051,4.28e-10,53;CL:0000785,7.35e-10,2;CL:0000955,7.35e-10,2;CL:0000818,7.35e-10,2;CL:0000954,7.35e-10,2;CL:0000816,7.35e-10,2;CL:0000817,7.53e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.45e-10;2!CL:0000954;5.97e-10;2!CL:0000051;1.62e-07;53!UBERON:0004872;8.67e-07;7!UBERON:0006595;9.80e-07;86 | |||
|ontology_enrichment_disease=DOID:0060058!1.59e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.70e-38!115;UBERON:0001829!9.01e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.96e-11;2!UBERON:0004921;5.93e-09;33!UBERON:0001044;6.83e-08;6!UBERON:0003293;6.83e-08;6!UBERON:0003294;6.83e-08;6!UBERON:0010047;6.83e-08;6!UBERON:0003408;6.83e-08;6!UBERON:0000167;6.83e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.88e-28,114;UBERON:0001829,7.23e-11,2;UBERON:0001044,6.52e-08,6;UBERON:0003293,6.52e-08,6;UBERON:0003294,6.52e-08,6;UBERON:0010047,6.52e-08,6;UBERON:0000167,6.52e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92960640696362,1.70603078984906,0,0,0,0,0.223915474239924,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05399502633369,0,0,0,0,0,0,0,0,0,0,0,0,3.27683166757279,0.889509253863555,5.9742231159311,3.60356388332411,5.17277195959035,3.30522436392431,1.90810750907073,2.27685187643779,3.52342313622563,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,2.39097585901284,9.11736921252787,0,0,0,0,0,0,0,4.43895325366201,7.18449277040819,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5393585306253,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,7.51889298278383,0,0,0,0,0.134802265961354,0,0,1.27718352450966,0,0,0.394584402849391,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46149475846729,0,0,0,0,0,0,0,3.84215390530835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,1.49730843868477,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,3.41719720216623,0,4.55662960881915,13.8926486107346,29.8393564165896,6.82038550933017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,0,3.83780436800028,1.98484471355718,0,0,0,0,0,0,0,2.30467975111558,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,5.59295566466361,0,0,12.7016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78479780269257,0,0,0,0,0,0,0,0,9.3044078800055,0.386747327841463,0,0,0,0,0,19.7253591863953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59135266258303,0.535928260312357,0,0,8.74259325794022,0,0.258355639344024,0.0620747142958579,0,0.190941474834495,0.404234377916439,1.52401723527873,0,9.49663947505684,4.30333232356058,0,0,0,0,0,0,0.244482888365733,0,0,8.05095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92960640696362,1.70603078984906,0,0,0,0,0.223915474239924,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05399502633369,0,0,0,0,0,0,0,0,0,0,0,0,3.27683166757279,0.889509253863555,5.9742231159311,3.60356388332411,5.17277195959035,3.30522436392431,1.90810750907073,2.27685187643779,3.52342313622563,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,2.39097585901284,9.11736921252787,0,0,0,0,0,0,0,4.43895325366201,7.18449277040819,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5393585306253,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,7.51889298278383,0,0,0,0,0.134802265961354,0,0,1.27718352450966,0,0,0.394584402849391,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46149475846729,0,0,0,0,0,0,0,3.84215390530835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,1.49730843868477,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,3.41719720216623,0,4.55662960881915,13.8926486107346,29.8393564165896,6.82038550933017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,0,3.83780436800028,1.98484471355718,0,0,0,0,0,0,0,2.30467975111558,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,5.59295566466361,0,0,12.7016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78479780269257,0,0,0,0,0,0,0,0,9.3044078800055,0.386747327841463,0,0,0,0,0,19.7253591863953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59135266258303,0.535928260312357,0,0,8.74259325794022,0,0.258355639344024,0.0620747142958579,0,0.190941474834495,0.404234377916439,1.52401723527873,0,9.49663947505684,4.30333232356058,0,0,0,0,0,0,0.244482888365733,0,0,8.05095174364105,0 | ||
|short_description=p5@AJ294735 | |short_description=p5@AJ294735 | ||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p5@AJ294735 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AJ294735_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 160bp_to_AJ294735_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.38e-31 | 14 |
lymphocyte of B lineage | 3.06e-25 | 24 |
pro-B cell | 3.06e-25 | 24 |
lymphoid lineage restricted progenitor cell | 2.46e-10 | 52 |
lymphocyte | 4.28e-10 | 53 |
common lymphoid progenitor | 4.28e-10 | 53 |
mature B cell | 7.35e-10 | 2 |
pre-B-II cell | 7.35e-10 | 2 |
transitional stage B cell | 7.35e-10 | 2 |
small pre-B-II cell | 7.35e-10 | 2 |
immature B cell | 7.35e-10 | 2 |
precursor B cell | 7.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.88e-28 | 114 |
major salivary gland | 7.23e-11 | 2 |
saliva-secreting gland | 6.52e-08 | 6 |
gland of oral region | 6.52e-08 | 6 |
gland of foregut | 6.52e-08 | 6 |
oral gland | 6.52e-08 | 6 |
oral cavity | 6.52e-08 | 6 |