FFCP PHASE1:Hg19::chr3:105087602..105087625,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:105087602..105087625,- | |||
|coexpression_cluster_id=C1505 | |||
|description=CAGE_peak_at_chr3:105087602..105087625,- | |||
|id=chr3:105087602..105087625,- | |||
|ontology_enrichment_celltype=CL:0000738!5.03e-22!140;CL:0002087!3.32e-19!119;CL:0002031!2.42e-18!124;CL:0000838!1.23e-15!52;CL:0000542!1.31e-15!53;CL:0000051!1.31e-15!53;CL:0000037!4.46e-14!172;CL:0000566!4.46e-14!172;CL:0000988!5.91e-13!182;CL:0002032!6.21e-13!165;CL:0000837!6.21e-13!165;CL:0002057!4.27e-12!42;CL:0000860!2.44e-11!45;CL:0000945!8.52e-09!24;CL:0000826!8.52e-09!24;CL:0000791!3.77e-07!18;CL:0000789!3.77e-07!18;CL:0002420!3.77e-07!18;CL:0002419!3.77e-07!18;CL:0000790!3.77e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.61e-11;6!CL:0002393;2.83e-10;6!CL:0002397;2.83e-10;6!CL:0000542;1.08e-08;53!CL:0000791;1.32e-08;18!CL:0000789;1.32e-08;18!CL:0002419;1.32e-08;18!CL:0000945;1.65e-07;24!CL:0000623;9.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.41e-21,136;CL:0002087,1.80e-19,115;CL:0002031,3.16e-18,120;CL:0000037,2.58e-15,168;CL:0000838,8.11e-15,52;CL:0000988,1.91e-14,177;CL:0000542,2.15e-14,53;CL:0000051,2.15e-14,53;CL:0002032,4.77e-14,161;CL:0000837,4.77e-14,161;CL:0000624,2.69e-11,6;CL:0000860,3.40e-10,42;CL:0002057,3.40e-10,42;CL:0000791,1.38e-08,18;CL:0000789,1.38e-08,18;CL:0002420,1.38e-08,18;CL:0002419,1.38e-08,18;CL:0000790,1.38e-08,18;CL:0000473,2.83e-08,48;CL:0000234,2.83e-08,48;CL:0000945,1.15e-07,24;CL:0000826,1.15e-07,24;CL:0002009,4.42e-07,61;CL:0000623,9.30e-07,3;CL:0000825,9.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.08e-08;53!CL:0000790;1.32e-08;18!CL:0002057;9.30e-08;42 | |||
|ontology_enrichment_disease=DOID:1749!2.65e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.25e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.21e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.89e-09!102;UBERON:0003061!4.89e-09!102;UBERON:0002193!3.95e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,4.18680700783456,0.436882744260345,1.05506791291381,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.61130724598361,0.328402357799783,0.865818594450472,1.57345710739562,2.30297638858328,0.77408061658038,3.67768489791571,0.90361775633475,1.47901604066715,1.39440961044543,1.56386155736164,0.587200878669695,4.9859586767869,5.41470008169383,6.51032612147556,0,0,0,0.436194716338694,0,0.727752183563449,0.929716147622738,1.23350366406548,2.47765096716083,1.1507695692886,0,2.12834006899727,1.03423704220986,0,4.06279459783025,0.188242339542605,0.818718450173537,0.224723484445085,0.612167784741805,1.60464513538047,1.91801137739712,0.329851300186716,0.398927315243264,0,0.580418477257168,1.70215567407342,0.622822248995575,3.51748131359441,0,1.08594422352558,1.21079900526674,1.84138817993782,2.53169909952708,1.05627643155971,1.06302149982522,2.30624510059213,0.336985893439485,0.600707571366025,0.803627933485401,0.855038231223746,0.19891667719909,0.182664153764634,0,0.546138611262131,3.55803701545422,2.98711155796555,1.20118796110804,0.574752439954483,0.661044872784862,0,22.1993057952685,11.7447437874188,11.4681968437569,0,0.560508562981536,0.790152254325231,11.0157471263747,13.7553766962208,17.2705259159588,1.67186495390678,1.30368906653436,0.946895611469467,1.94826728407911,1.00269411196656,4.12448270464772,7.08908462667588,10.2905468230706,0.896639238079726,1.95089021339817,1.15106533222573,1.65810010671509,0.579606171470105,1.92772532110679,2.40786745280742,2.09071047609954,0.793165398882963,5.74830740402882,7.55980380061786,11.3858861408776,1.27426165729639,0.651083453856419,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0.821127996921047,16.1285394579786,15.2440911596599,9.41358625238193,0,0,0,0,0,0,0,0,0.661743720148475,0.665188192387692,0.43917392846563,0.327447688744282,0,1.11235332835329,0,0,0,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.872188104285069,0,0,1.05927344650575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0,0.10075209822764,0,0.57978255948989,0.545492241181669,0.286804595389004,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.653638332277218,0.237270619111097,1.07865046528132,0,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0,0,0.343135620597051,0.548751427043128,0,0.502644862058154,0.555530670951178,0,0,2.88662684050547,0,0.117408694235822,0.144366447761074,0,0,1.58040879591855,3.43394464837949,0,0.234004265139238,0,1.87467667973554,0.335964256397719,0.850650583454319,0.716468181622786,0.290633938513962,0.766765358330422,0,0.528290604079356,0.207328115540772,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.112085143993527,10.836691811106,9.70324086867828,7.57223914050515,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,2.68798433959754,4.31428401637234,0.853820462427555,3.03127571446259,0,1.20956117331872,0,0.460385919864187,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.601519410909855,0.368323955743585,0.114814448164607,0,0,0.451199612907412,0.462092022626489,1.56869953835371,0,0.527758144464379,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,1.01950509218015,1.66215201785745,0.895499018888713,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0.330569830721956,0.384380134730212,2.55225424989168,0.809262246844399,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.487426979262569,0,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0,0.354761064070598,0.422215270595328,0,0,0,0.962221127255121,2.01090682660736,1.08890984861323,0.564862804660675,0,0,0,0,0.507447609232169,0,0.569647187174163,1.42939065274673,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0,0,1.47024129588619,0.185803175125719,0,0.426851060090485,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0.605399121573143,0,0,0,0,0,0.19538809540204,0,0,0,0,0,2.61996756571508,0,0,0,0,0.95497793895076,0,3.07160702099232,0,0,0,0.329607748453519,0,1.79323189425963,0.276283915531148,0,0,1.84627208191604,0,0.718946809178615,0.895105873378046,0,0.591860433821602,0,0,0,0,0,0.260427761085233,0.349839999984783,0,0.682760689712998,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,1.25481369850743,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,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| |||
|short_description=p@chr3:105087602..105087625,- | |||
}} |
Latest revision as of 13:55, 29 July 2015
Short description: | p@chr3:105087602..105087625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:105087602..105087625, - |
Coexpression cluster: | C1505_immature_CD19_CD4_CD8_Natural_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.41e-21 | 136 |
nongranular leukocyte | 1.80e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 3.16e-18 | 120 |
hematopoietic stem cell | 2.58e-15 | 168 |
lymphoid lineage restricted progenitor cell | 8.11e-15 | 52 |
hematopoietic cell | 1.91e-14 | 177 |
lymphocyte | 2.15e-14 | 53 |
common lymphoid progenitor | 2.15e-14 | 53 |
hematopoietic oligopotent progenitor cell | 4.77e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.77e-14 | 161 |
CD4-positive, alpha-beta T cell | 2.69e-11 | 6 |
classical monocyte | 3.40e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.40e-10 | 42 |
mature alpha-beta T cell | 1.38e-08 | 18 |
alpha-beta T cell | 1.38e-08 | 18 |
immature T cell | 1.38e-08 | 18 |
mature T cell | 1.38e-08 | 18 |
immature alpha-beta T cell | 1.38e-08 | 18 |
defensive cell | 2.83e-08 | 48 |
phagocyte | 2.83e-08 | 48 |
lymphocyte of B lineage | 1.15e-07 | 24 |
pro-B cell | 1.15e-07 | 24 |
macrophage dendritic cell progenitor | 4.42e-07 | 61 |
natural killer cell | 9.30e-07 | 3 |
pro-NK cell | 9.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.21e-11 | 14 |