FFCP PHASE1:Hg19::chr3:132975886..132975894,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504993_5end | |association_with_transcript=0bp_to_ENST00000504993_5end | ||
|cluster_id=chr3:132975886..132975894,- | |||
|coexpression_cluster_id=C102 | |coexpression_cluster_id=C102 | ||
|description=CAGE_peak_1_at_ENST00000504993_5end | |description=CAGE_peak_1_at_ENST00000504993_5end | ||
Latest revision as of 15:56, 29 July 2015
| Short description: | p1@ENST00000504993 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ENST00000504993_5end |
| Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
| Association with transcript: | 0bp_to_ENST00000504993_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ENST00000504993 |
|---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| sympathetic nervous system | 4.21e-21 | 5 |
| autonomic nervous system | 4.21e-21 | 5 |
| peripheral nervous system | 2.19e-12 | 8 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type benign neoplasm | 5.96e-34 | 3 |
| leiomyoma | 5.96e-34 | 3 |
| benign neoplasm | 7.14e-26 | 4 |
| neuroendocrine tumor | 7.67e-18 | 6 |
| neuroectodermal tumor | 2.73e-11 | 10 |
Showing 1 to 5 of 5 entries
