FFCP PHASE1:Hg19::chr3:167452405..167452409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:167452405..167452409,+ | |||
|description=CAGE_peak_at_chr3:167452405..167452409,+ | |description=CAGE_peak_at_chr3:167452405..167452409,+ | ||
|id=chr3:167452405..167452409,+ | |id=chr3:167452405..167452409,+ | ||
|ontology_enrichment_celltype=CL:0000012!4.45e-07!682;CL:0000548!6.00e-07!679;CL:0000004!6.00e-07!679;CL:0000255!6.00e-07!679 | |ontology_enrichment_celltype=CL:0000012!4.45e-07!682;CL:0000548!6.00e-07!679;CL:0000004!6.00e-07!679;CL:0000255!6.00e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000307;3.21e-12;3!CL:0000946;1.26e-09;1!CL:0000786;1.26e-09;1!CL:0000037;3.12e-09;1!CL:0001024;3.12e-09;1!CL:0002202;8.36e-09;9!CL:0002632;8.36e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.13e-12,3;CL:0000069,3.13e-12,3;CL:0000307,3.13e-12,3;CL:0000377,3.13e-12,3;CL:0000946,1.21e-09,1;CL:0000786,1.21e-09,1;CL:0000980,1.21e-09,1;CL:0001024,4.87e-09,1;CL:0002202,7.53e-09,9;CL:0002632,7.53e-09,9 | |||
|ontology_enrichment_development_v019=CL:0000377;3.21e-12;3 | |||
|ontology_enrichment_disease=DOID:162!2.60e-18!235;DOID:14566!9.98e-18!239;DOID:0050687!5.81e-12!143;DOID:1749!1.05e-09!14;DOID:0050686!1.64e-09!137;DOID:305!2.63e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.44e-27;14!DOID:2355;1.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.21e-27,14;DOID:2355,1.12e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;6.75e-19;4!UBERON:0004785;6.75e-19;4!UBERON:0000974;8.61e-13;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,4.28e-19,4;UBERON:0004785,4.28e-19,4;UBERON:0000974,6.00e-08,10 | |||
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| ||
|short_description=p@chr3:167452405..167452409,+ | |short_description=p@chr3:167452405..167452409,+ | ||
}} | }} |
Latest revision as of 17:58, 29 July 2015
Short description: | p@chr3:167452405..167452409, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:167452405..167452409, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.13e-12 | 3 |
branched duct epithelial cell | 3.13e-12 | 3 |
tracheal epithelial cell | 3.13e-12 | 3 |
tracheoblast | 3.13e-12 | 3 |
antibody secreting cell | 1.21e-09 | 1 |
plasma cell | 1.21e-09 | 1 |
plasmablast | 1.21e-09 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.87e-09 | 1 |
epithelial cell of tracheobronchial tree | 7.53e-09 | 9 |
epithelial cell of lower respiratory tract | 7.53e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 4.28e-19 | 4 |
respiratory system mucosa | 4.28e-19 | 4 |
neck | 6.00e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.21e-27 | 14 |
anemia | 1.12e-09 | 1 |