FFCP PHASE1:Hg19::chr3:170626612..170626637,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170626612..170626637,+ | |||
|coexpression_cluster_id=C4305 | |coexpression_cluster_id=C4305 | ||
|description=CAGE_peak_at_chr3:170626612..170626637,+ | |description=CAGE_peak_at_chr3:170626612..170626637,+ | ||
|id=chr3:170626612..170626637,+ | |id=chr3:170626612..170626637,+ | ||
|ontology_enrichment_celltype=CL:0000077;4.12e-20;19!CL:0002563;4.90e-08;4!CL:0002253;1.53e-07;2!CL:0002097;2.52e-07;2!CL:0002535;3.43e-07;2!CL:1000415;3.75e-07;2!CL:0000082;9.80e-07;19 | |ontology_enrichment_celltype=CL:0000077!8.82e-09!19 | ||
| | |ontology_enrichment_celltype_v019=CL:0000077;4.12e-20;19!CL:0002563;4.90e-08;4!CL:0002253;1.53e-07;2!CL:0002097;2.52e-07;2!CL:0002535;3.43e-07;2!CL:1000415;3.75e-07;2!CL:0000082;9.80e-07;19 | ||
|ontology_enrichment_disease=DOID:0050615;1.49e-10;16!DOID:1749;4.11e-10;14!DOID:1324;8.32e-09;15!DOID:3905;2.69e-08;9!DOID:1325;4.76e-07;7!DOID:3904;4.76e-07;7 | |ontology_enrichment_celltype_v019_2=CL:0000077,3.75e-20,19;CL:0000076,1.36e-12,63;CL:0000066,5.62e-10,253;CL:0002563,5.15e-08,4;CL:0002253,1.58e-07,2;CL:0002097,2.86e-07,2;CL:1000415,3.55e-07,2;CL:0002535,5.76e-07,2;CL:0000082,9.47e-07,19 | ||
|ontology_enrichment_uberon=UBERON:0001242;4.90e-08;4!UBERON:0001262;4.90e-08;4!UBERON:0004786;4.90e-08;4!UBERON:0004808;4.90e-08;4!UBERON:0001277;4.90e-08;4!UBERON:0001052;1.43e-07;4!UBERON:0005911;2.33e-07;36!UBERON:0002294;3.04e-07;7!UBERON:0001173;3.04e-07;7!UBERON:0006955;3.43e-07;2!UBERON:0004801;3.43e-07;2!UBERON:0004802;9.80e-07;19!UBERON:0000115;9.80e-07;19 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!6.07e-22!235;DOID:14566!1.31e-20!239;DOID:0050687!1.04e-19!143;DOID:305!6.13e-16!106;DOID:1749!5.84e-08!14;DOID:3095!3.22e-07!22;DOID:2994!3.22e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.49e-10;16!DOID:1749;4.11e-10;14!DOID:1324;8.32e-09;15!DOID:3905;2.69e-08;9!DOID:1325;4.76e-07;7!DOID:3904;4.76e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.48e-24,143;DOID:162,3.92e-21,235;DOID:14566,1.95e-20,239;DOID:305,4.26e-18,106;DOID:0050615,1.27e-10,16;DOID:1749,3.75e-10,14;DOID:1324,7.95e-09,15;DOID:3905,3.58e-08,9;DOID:1325,3.96e-07,7;DOID:3904,3.96e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.29e-12!57;UBERON:0005068!4.29e-12!57;UBERON:0006241!4.29e-12!57;UBERON:0007135!4.29e-12!57;UBERON:0000955!1.68e-10!69;UBERON:0006238!1.68e-10!69;UBERON:0001017!2.57e-10!82;UBERON:0000073!4.02e-10!94;UBERON:0001016!4.02e-10!94;UBERON:0002616!5.82e-10!59;UBERON:0005743!9.64e-10!86;UBERON:0002346!3.28e-09!90;UBERON:0003075!6.13e-08!86;UBERON:0007284!6.13e-08!86;UBERON:0002780!1.18e-07!41;UBERON:0001890!1.18e-07!41;UBERON:0006240!1.18e-07!41;UBERON:0003080!2.81e-07!42;UBERON:0007023!5.89e-07!115;UBERON:0003076!9.84e-07!15;UBERON:0003057!9.84e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;4.90e-08;4!UBERON:0001262;4.90e-08;4!UBERON:0004786;4.90e-08;4!UBERON:0004808;4.90e-08;4!UBERON:0001277;4.90e-08;4!UBERON:0001052;1.43e-07;4!UBERON:0005911;2.33e-07;36!UBERON:0002294;3.04e-07;7!UBERON:0001173;3.04e-07;7!UBERON:0006955;3.43e-07;2!UBERON:0004801;3.43e-07;2!UBERON:0004802;9.80e-07;19!UBERON:0000115;9.80e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.15e-08,4;UBERON:0001262,5.15e-08,4;UBERON:0004786,5.15e-08,4;UBERON:0004808,5.15e-08,4;UBERON:0001277,5.15e-08,4;UBERON:0001052,1.79e-07,4;UBERON:0006955,5.76e-07,2;UBERON:0004801,5.76e-07,2;UBERON:0004802,9.47e-07,19;UBERON:0000115,9.47e-07,19 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.276149695926898,0,0,0,0,0,0,0,0,0.397589304964456,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,1.7658523976586,7.13332943550059,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,2.37061319387782,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0.355123450626254,0,0,0,6.16383192917273,0.200506470303285,0,0,0.364182336013434,0.262248829918848,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.427296284509893,0,3.67560323971548,0,0,0.569134746787313,0,0,0,0.423347165447766,0.649243880549111,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0.921722292925374,0.894704431569664,0.500547425135725,0.586164286206121,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,0,0.281338832821026,1.55832187032068,0,0,0.19924798825107,0,1.0077309914171,0.102268682502155,0,0.311039587661807,0.359473404589307,1.79021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,2.04828206913899,7.37335585849022,1.89110145414349,0,0.874813840149763,0,0,0.120596438625408,1.52581736317083,0.110579259931225,0.295547618953547,0,1.0893846351899,0,0.230850775511391,0.455768223388005,0,2.51321404347362,1.3037684630641,0,0,0.533034776018635,0,0,0,0,0.19606253431774,0.335643173951685,0.37950746544837,0,0,0,6.78494742882916,3.02944095638928,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0.67401132980677,0,0.937057782901357,0.364909578431332,0.391329237864179,0,0,0,0.30607276163049,0.063186579628488,1.65355761355942,0.207376382794494,3.32326936353593,0.330991955875499,2.5114633472578,0,0.569219092059585,0,0,1.56787835863004,9.48945351726388,0.17472666824203,4.64362287673365,0.19351266257817,0.292357268344742,0.328461828212837,0.0969890164884194,0.617792886840502,0.225980740780532,0,0.397429223405979,0.50648636764703,7.43095254392251,1.36269994427607,0.213452994739353,3.79638258206047,0,0.114536596165916,0.171594997861965,0.14405479798815,4.72159635148644,1.41416420770077,0.407712618220842,0.209205692624666,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0.157566364614447,0.247247575143499,0.404421263125109,0,0,0,0.136203406111576,0,0.275078873194468,0.415440338029185,0,0,0.728994679896296,0,0.315222829196793,0,1.05600336519407,0,4.79787993298613,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0,0,0.414239055347196,0,0,0,5.10673006216145,0,0,0,0,1.57054096250234,0.886068179966986,0.122026264901963,0.1251909307065,1.14681839138014,0.332787154610557,0.869349641179368,0.415045904808692,0.37494122388632,0.454947352624943,1.7127920012698,0.705797459094515,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,2.31143796488764,4.50327341887344,8.09082305092156,1.13352962756136,1.15761237161917,1.71315693154527,0.895444205407437,0.926404341482917,2.85069264452319,1.76689145945881,1.54331230616732,1.01365464391844,0,5.52688546769918,3.3424595179512,0.414775308455192,0,0,0,0.982829546539238,0,0.211312123358627,0,0.213383459388282,0,5.67515953566836,0,0,0,2.30209868346573,1.07824811396682,0.471797825567689,2.40261204022431,0.848662649770126,0.425149840203366,0.247871528518004,0,0,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| ||
|short_description=p@chr3:170626612..170626637,+ | |short_description=p@chr3:170626612..170626637,+ | ||
}} | }} |
Latest revision as of 18:13, 29 July 2015
Short description: | p@chr3:170626612..170626637, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170626612..170626637, + |
Coexpression cluster: | C4305_epidermoid_papillotubular_mesothelioma_malignant_bronchioalveolar_myxofibrosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.75e-20 | 19 |
squamous epithelial cell | 1.36e-12 | 63 |
epithelial cell | 5.62e-10 | 253 |
intestinal epithelial cell | 5.15e-08 | 4 |
epithelial cell of large intestine | 1.58e-07 | 2 |
cortical cell of adrenal gland | 2.86e-07 | 2 |
epithelial cell of gall bladder | 3.55e-07 | 2 |
epithelial cell of cervix | 5.76e-07 | 2 |
epithelial cell of lung | 9.47e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.15e-08 | 4 |
wall of intestine | 5.15e-08 | 4 |
gastrointestinal system mucosa | 5.15e-08 | 4 |
gastrointestinal system epithelium | 5.15e-08 | 4 |
intestinal epithelium | 5.15e-08 | 4 |
rectum | 1.79e-07 | 4 |
uterine epithelium | 5.76e-07 | 2 |
cervix epithelium | 5.76e-07 | 2 |
respiratory tract epithelium | 9.47e-07 | 19 |
lung epithelium | 9.47e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.48e-24 | 143 |
cancer | 3.92e-21 | 235 |
disease of cellular proliferation | 1.95e-20 | 239 |
carcinoma | 4.26e-18 | 106 |
respiratory system cancer | 1.27e-10 | 16 |
squamous cell carcinoma | 3.75e-10 | 14 |
lung cancer | 7.95e-09 | 15 |
lung carcinoma | 3.58e-08 | 9 |
bronchus cancer | 3.96e-07 | 7 |
bronchogenic carcinoma | 3.96e-07 | 7 |