FFCP PHASE1:Hg19::chr3:172351514..172351536,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:172351514..172351536,- | |||
|description=CAGE_peak_at_chr3:172351514..172351536,- | |description=CAGE_peak_at_chr3:172351514..172351536,- | ||
|id=chr3:172351514..172351536,- | |id=chr3:172351514..172351536,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.83e-27;5!CL:0002593;1.33e-17;2!CL:0002619;4.70e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.46e-27,5;CL:0002593,1.04e-17,2;CL:0002619,5.90e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.70e-12;3!DOID:127;4.70e-12;3!DOID:0060072;2.90e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.03e-12,3;DOID:127,2.03e-12,3;DOID:0060072,1.55e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.83e-27;5!UBERON:0001533;1.83e-27;5!UBERON:0003513;1.06e-19;7!UBERON:0002456;1.33e-17;2!UBERON:0002171;1.15e-09;1!UBERON:0006518;1.15e-09;1!UBERON:0008949;1.15e-09;1!UBERON:0000101;1.15e-09;1!UBERON:0002167;1.15e-09;1!UBERON:0004573;2.77e-08;33!UBERON:0004571;2.77e-08;33!UBERON:0001637;5.38e-07;42!UBERON:0003509;5.38e-07;42!UBERON:0004572;5.38e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.46e-27,5;UBERON:0001533,1.46e-27,5;UBERON:0003513,9.03e-20,7;UBERON:0002456,1.04e-17,2;UBERON:0002171,1.25e-09,1;UBERON:0006518,1.25e-09,1;UBERON:0008949,1.25e-09,1;UBERON:0000101,1.25e-09,1;UBERON:0002167,1.25e-09,1;UBERON:0004573,8.93e-09,33;UBERON:0004571,8.93e-09,33;UBERON:0001637,8.70e-07,42;UBERON:0003509,8.70e-07,42;UBERON:0004572,8.70e-07,42 | |||
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| ||
|short_description=p@chr3:172351514..172351536,- | |short_description=p@chr3:172351514..172351536,- | ||
}} | }} |
Latest revision as of 18:20, 29 July 2015
Short description: | p@chr3:172351514..172351536, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:172351514..172351536, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.46e-27 | 5 |
smooth muscle cell of the internal thoracic artery | 1.04e-17 | 2 |
adult endothelial progenitor cell | 5.90e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.46e-27 | 5 |
subclavian artery | 1.46e-27 | 5 |
trunk blood vessel | 9.03e-20 | 7 |
internal thoracic artery | 1.04e-17 | 2 |
lower lobe of right lung | 1.25e-09 | 1 |
right lung lobe | 1.25e-09 | 1 |
lower lobe of lung | 1.25e-09 | 1 |
lobe of lung | 1.25e-09 | 1 |
right lung | 1.25e-09 | 1 |
systemic artery | 8.93e-09 | 33 |
systemic arterial system | 8.93e-09 | 33 |
artery | 8.70e-07 | 42 |
arterial blood vessel | 8.70e-07 | 42 |
arterial system | 8.70e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.03e-12 | 3 |
leiomyoma | 2.03e-12 | 3 |
benign neoplasm | 1.55e-09 | 4 |