FFCP PHASE1:Hg19::chr3:189655844..189655854,+: Difference between revisions
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|id=chr3:189655844..189655854,+
|short_description=p@chr3:189655844..189655854,+
|description=CAGE_peak_at_chr3:189655844..189655854,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:189655844..189655854,+ | |||
|description=CAGE_peak_at_chr3:189655844..189655854,+ | |||
|id=chr3:189655844..189655854,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.91e-35!43;CL:0000223!1.30e-26!59;CL:0000066!7.48e-23!254;CL:0000622!1.83e-17!5;CL:0002368!5.19e-16!13;CL:0000154!1.71e-14!6;CL:0000068!1.48e-11!3;CL:0000069!1.48e-11!3;CL:0000307!1.48e-11!3;CL:0000377!1.48e-11!3;CL:0002251!3.25e-11!21;CL:0002623!6.62e-11!3;CL:0002621!1.97e-10!3;CL:0000150!1.55e-09!9;CL:0000220!2.00e-09!246;CL:0002321!2.79e-09!248;CL:0002149!4.76e-09!6;CL:0002255!4.76e-09!6;CL:0002159!6.04e-09!13;CL:0000076!1.10e-08!62;CL:0000317!2.84e-08!2;CL:1000448!2.84e-08!2;CL:0002308!2.84e-08!2;CL:0002140!2.84e-08!2;CL:0002327!8.23e-08!4;CL:0002589!3.52e-07!2;CL:0000362!3.76e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.52e-44;3!CL:0002368;1.39e-23;13!CL:0000317;9.07e-18;2!CL:1000448;9.07e-18;2!CL:0002308;9.07e-18;2!CL:0002140;9.07e-18;2!CL:0002202;1.22e-15;9!CL:0002632;1.22e-15;9!CL:0002541;2.59e-12;3!CL:0000622;6.55e-08;5!CL:0000197;8.48e-07;6!CL:0000154;8.48e-07;6!CL:0000098;8.48e-07;6!CL:0002167;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.91e-44,3;CL:0000069,1.91e-44,3;CL:0000307,1.91e-44,3;CL:0000377,1.91e-44,3;CL:0002368,1.50e-23,13;CL:0000317,1.07e-17,2;CL:1000448,1.07e-17,2;CL:0002308,1.07e-17,2;CL:0002140,1.07e-17,2;CL:0002202,1.31e-15,9;CL:0002632,1.31e-15,9;CL:0002541,2.07e-12,3;CL:0000622,7.01e-08,5;CL:0002076,7.94e-08,42;CL:0000197,8.48e-07,6;CL:0000098,8.48e-07,6;CL:0002167,8.48e-07,6;CL:0000154,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.52e-44;3 | |||
|ontology_enrichment_disease=DOID:1749!7.72e-18!14;DOID:3001!4.76e-09!6;DOID:120!2.89e-08!27;DOID:193!1.39e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.10e-13!72;UBERON:0000166!3.56e-11!21;UBERON:0001949!1.97e-10!3;UBERON:0000165!8.27e-10!28;UBERON:0000930!8.27e-10!28;UBERON:0000161!4.53e-09!35;UBERON:0003100!5.00e-09!41;UBERON:0002419!2.84e-08!2;UBERON:0007771!2.84e-08!2;UBERON:0003297!2.84e-08!2;UBERON:0001821!2.84e-08!2;UBERON:0003487!2.84e-08!2;UBERON:0001820!2.84e-08!2;UBERON:0005089!2.84e-08!2;UBERON:0005088!2.84e-08!2;UBERON:0003126!4.83e-08!7;UBERON:0001005!4.83e-08!7;UBERON:0001911!8.23e-08!4;UBERON:0005333!8.23e-08!4;UBERON:0008425!8.23e-08!4;UBERON:0005311!8.23e-08!4;UBERON:0000065!9.75e-08!53;UBERON:0004119!2.42e-07!169;UBERON:0000925!2.42e-07!169;UBERON:0006595!2.42e-07!169;UBERON:0001529!3.52e-07!2;UBERON:0007204!3.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;8.62e-20;7!UBERON:0001005;8.62e-20;7!UBERON:0002419;9.07e-18;2!UBERON:0007771;9.07e-18;2!UBERON:0003297;9.07e-18;2!UBERON:0001821;9.07e-18;2!UBERON:0003487;9.07e-18;2!UBERON:0001820;9.07e-18;2!UBERON:0003124;2.59e-12;3!UBERON:0000920;2.59e-12;3!UBERON:0007196;8.46e-10;15!UBERON:0001558;8.46e-10;15!UBERON:0000065;5.76e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,9.49e-20,7;UBERON:0001005,9.49e-20,7;UBERON:0002419,1.07e-17,2;UBERON:0007771,1.07e-17,2;UBERON:0003297,1.07e-17,2;UBERON:0001821,1.07e-17,2;UBERON:0003487,1.07e-17,2;UBERON:0001820,1.07e-17,2;UBERON:0005089,1.07e-17,2;UBERON:0005088,1.07e-17,2;UBERON:0000920,2.07e-12,3;UBERON:0007196,8.85e-10,15;UBERON:0001558,8.85e-10,15 | |||
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| ||
|short_description=p@chr3:189655844..189655854,+ | |||
}} | }} |
Latest revision as of 19:24, 29 July 2015
Short description: | p@chr3:189655844..189655854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:189655844..189655854, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.91e-44 | 3 |
branched duct epithelial cell | 1.91e-44 | 3 |
tracheal epithelial cell | 1.91e-44 | 3 |
tracheoblast | 1.91e-44 | 3 |
respiratory epithelial cell | 1.50e-23 | 13 |
sebum secreting cell | 1.07e-17 | 2 |
epithelial cell of sweat gland | 1.07e-17 | 2 |
epithelial cell of skin gland | 1.07e-17 | 2 |
acinar cell of sebaceous gland | 1.07e-17 | 2 |
epithelial cell of tracheobronchial tree | 1.31e-15 | 9 |
epithelial cell of lower respiratory tract | 1.31e-15 | 9 |
chorionic membrane mesenchymal stem cell | 2.07e-12 | 3 |
acinar cell | 7.01e-08 | 5 |
endo-epithelial cell | 7.94e-08 | 42 |
receptor cell | 8.48e-07 | 6 |
sensory epithelial cell | 8.48e-07 | 6 |
olfactory epithelial cell | 8.48e-07 | 6 |
protein secreting cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
trachea | 9.49e-20 | 7 |
respiratory airway | 9.49e-20 | 7 |
skin gland | 1.07e-17 | 2 |
epidermis gland | 1.07e-17 | 2 |
gland of integumental system | 1.07e-17 | 2 |
sebaceous gland | 1.07e-17 | 2 |
skin sebaceous gland | 1.07e-17 | 2 |
sweat gland | 1.07e-17 | 2 |
sweat gland placode | 1.07e-17 | 2 |
sebaceous gland placode | 1.07e-17 | 2 |
egg chorion | 2.07e-12 | 3 |
tracheobronchial tree | 8.85e-10 | 15 |
lower respiratory tract | 8.85e-10 | 15 |