FFCP PHASE1:Hg19::chr3:194040528..194040540,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:194040528..194040540,- | |||
|coexpression_cluster_id=C4317 | |coexpression_cluster_id=C4317 | ||
|description=CAGE_peak_at_chr3:194040528..194040540,- | |description=CAGE_peak_at_chr3:194040528..194040540,- | ||
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|ontology_enrichment_celltype=CL:0000066!1.25e-35!254;CL:0002076!3.40e-18!43;CL:0000223!8.71e-17!59;CL:0002251!2.52e-12!21;CL:0000076!1.47e-08!62 | |ontology_enrichment_celltype=CL:0000066!1.25e-35!254;CL:0002076!3.40e-18!43;CL:0000223!8.71e-17!59;CL:0002251!2.52e-12!21;CL:0000076!1.47e-08!62 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.46e-07,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!8.11e-46!106;DOID:0050687!8.93e-34!143;DOID:162!1.12e-22!235;DOID:14566!8.26e-22!239;DOID:1749!6.90e-17!14;DOID:299!2.24e-14!25 | |ontology_enrichment_disease=DOID:305!8.11e-46!106;DOID:0050687!8.93e-34!143;DOID:162!1.12e-22!235;DOID:14566!8.26e-22!239;DOID:1749!6.90e-17!14;DOID:299!2.24e-14!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.49e-23;14!DOID:6193;8.53e-11;1!DOID:3151;2.62e-10;1!DOID:3149;2.62e-10;1!DOID:3908;4.21e-08;5 | |ontology_enrichment_disease_v019=DOID:1749;6.49e-23;14!DOID:6193;8.53e-11;1!DOID:3151;2.62e-10;1!DOID:3149;2.62e-10;1!DOID:3908;4.21e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,5.26e-23,14;DOID:305,2.23e-12,106;DOID:6193,8.14e-11,1;DOID:3151,1.57e-10,1;DOID:3149,1.57e-10,1;DOID:0050687,3.50e-10,143;DOID:3908,4.53e-08,5;DOID:162,3.04e-07,235;DOID:14566,4.90e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.50e-18!169;UBERON:0000925!1.50e-18!169;UBERON:0006595!1.50e-18!169;UBERON:0001007!1.75e-16!155;UBERON:0001555!1.75e-16!155;UBERON:0007026!1.75e-16!155;UBERON:0000077!2.44e-16!130;UBERON:0001041!1.85e-14!98;UBERON:0004921!4.32e-14!129;UBERON:0004185!4.32e-14!129;UBERON:0002294!7.70e-14!7;UBERON:0001173!7.70e-14!7;UBERON:0004912!7.70e-14!7;UBERON:0001737!1.97e-12!9;UBERON:0001004!7.58e-12!72;UBERON:0000065!2.55e-11!53;UBERON:0000072!3.49e-10!46;UBERON:0001557!8.14e-10!19;UBERON:0008947!4.42e-09!38;UBERON:0003258!4.42e-09!38;UBERON:0002394!4.65e-09!4;UBERON:0003928!4.65e-09!4;UBERON:0000344!9.25e-09!12;UBERON:0003104!8.55e-08!238;UBERON:0009142!8.55e-08!238 | |ontology_enrichment_uberon=UBERON:0004119!1.50e-18!169;UBERON:0000925!1.50e-18!169;UBERON:0006595!1.50e-18!169;UBERON:0001007!1.75e-16!155;UBERON:0001555!1.75e-16!155;UBERON:0007026!1.75e-16!155;UBERON:0000077!2.44e-16!130;UBERON:0001041!1.85e-14!98;UBERON:0004921!4.32e-14!129;UBERON:0004185!4.32e-14!129;UBERON:0002294!7.70e-14!7;UBERON:0001173!7.70e-14!7;UBERON:0004912!7.70e-14!7;UBERON:0001737!1.97e-12!9;UBERON:0001004!7.58e-12!72;UBERON:0000065!2.55e-11!53;UBERON:0000072!3.49e-10!46;UBERON:0001557!8.14e-10!19;UBERON:0008947!4.42e-09!38;UBERON:0003258!4.42e-09!38;UBERON:0002394!4.65e-09!4;UBERON:0003928!4.65e-09!4;UBERON:0000344!9.25e-09!12;UBERON:0003104!8.55e-08!238;UBERON:0009142!8.55e-08!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.09e-12;7!UBERON:0001173;3.09e-12;7!UBERON:0000997;8.53e-11;1!UBERON:0005056;8.53e-11;1!UBERON:0004176;8.53e-11;1!UBERON:0004913;2.62e-10;1!UBERON:0003703;2.62e-10;1!UBERON:0001174;2.62e-10;1!UBERON:0004914;2.62e-10;1!UBERON:0002394;4.54e-10;4!UBERON:0003928;4.54e-10;4!UBERON:0000058;1.01e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0002294;3.09e-12;7!UBERON:0001173;3.09e-12;7!UBERON:0000997;8.53e-11;1!UBERON:0005056;8.53e-11;1!UBERON:0004176;8.53e-11;1!UBERON:0004913;2.62e-10;1!UBERON:0003703;2.62e-10;1!UBERON:0001174;2.62e-10;1!UBERON:0004914;2.62e-10;1!UBERON:0002394;4.54e-10;4!UBERON:0003928;4.54e-10;4!UBERON:0000058;1.01e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,8.95e-11,1;UBERON:0005056,8.95e-11,1;UBERON:0004913,2.74e-10,1;UBERON:0003703,2.74e-10,1;UBERON:0001174,2.74e-10,1;UBERON:0004914,2.74e-10,1;UBERON:0002294,1.45e-09,9;UBERON:0001173,1.45e-09,9;UBERON:0004912,1.45e-09,9;UBERON:0002394,5.42e-07,6;UBERON:0003928,5.42e-07,6 | |||
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| ||
|short_description=p@chr3:194040528..194040540,- | |short_description=p@chr3:194040528..194040540,- | ||
}} | }} |
Latest revision as of 19:36, 29 July 2015
Short description: | p@chr3:194040528..194040540, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:194040528..194040540, - |
Coexpression cluster: | C4317_renal_squamous_bile_glassy_epidermoid_epithelioid_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.46e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 8.95e-11 | 1 |
external female genitalia | 8.95e-11 | 1 |
hepatopancreatic ampulla | 2.74e-10 | 1 |
extrahepatic bile duct | 2.74e-10 | 1 |
common bile duct | 2.74e-10 | 1 |
duodenal papilla | 2.74e-10 | 1 |
biliary system | 1.45e-09 | 9 |
biliary tree | 1.45e-09 | 9 |
biliary bud | 1.45e-09 | 9 |
bile duct | 5.42e-07 | 6 |
digestive system duct | 5.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.26e-23 | 14 |
carcinoma | 2.23e-12 | 106 |
epithelioid sarcoma | 8.14e-11 | 1 |
skin squamous cell carcinoma | 1.57e-10 | 1 |
keratoacanthoma | 1.57e-10 | 1 |
cell type cancer | 3.50e-10 | 143 |
non-small cell lung carcinoma | 4.53e-08 | 5 |
cancer | 3.04e-07 | 235 |
disease of cellular proliferation | 4.90e-07 | 239 |