FFCP PHASE1:Hg19::chr3:195869677..195869694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_uc011btt.1_5end | |association_with_transcript=51bp_to_uc011btt.1_5end | ||
|cluster_id=chr3:195869677..195869694,+ | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_1_at_uc011btt.1_5end | |description=CAGE_peak_1_at_uc011btt.1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000624!3.73e-07!6 | |ontology_enrichment_celltype=CL:0000624!3.73e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.48e-09;7!CL:0000586;3.48e-09;7!CL:0000083;1.06e-07;4 | |ontology_enrichment_celltype_v019=CL:0000039;3.48e-09;7!CL:0000586;3.48e-09;7!CL:0000083;1.06e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.42e-09,7;CL:0000586,4.42e-09,7;CL:0000083,8.14e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.40e-08;1 | |ontology_enrichment_development_v019=UBERON:0006298;6.40e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;2.61e-08;1!DOID:326;2.61e-08;1!DOID:3978;2.61e-08;1!DOID:3394;2.61e-08;1!DOID:5844;2.61e-08;1!DOID:1036;5.88e-08;8!DOID:1799;6.40e-08;1!DOID:10165;6.40e-08;1!DOID:1798;6.40e-08;1!DOID:1793;1.06e-07;4 | |ontology_enrichment_disease_v019=DOID:178;2.61e-08;1!DOID:326;2.61e-08;1!DOID:3978;2.61e-08;1!DOID:3394;2.61e-08;1!DOID:5844;2.61e-08;1!DOID:1036;5.88e-08;8!DOID:1799;6.40e-08;1!DOID:10165;6.40e-08;1!DOID:1798;6.40e-08;1!DOID:1793;1.06e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:178,2.35e-08,1;DOID:326,2.35e-08,1;DOID:3978,2.35e-08,1;DOID:3394,2.35e-08,1;DOID:5844,2.35e-08,1;DOID:1799,4.40e-08,1;DOID:10165,4.40e-08,1;DOID:1798,4.40e-08,1;DOID:1036,7.23e-08,8;DOID:1793,8.14e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.34e-16!14;UBERON:0000158!1.34e-16!14;UBERON:0003408!4.90e-14!10;UBERON:0003124!2.21e-12!7;UBERON:0001044!2.99e-11!6;UBERON:0003293!2.99e-11!6;UBERON:0003294!2.99e-11!6;UBERON:0010047!2.99e-11!6;UBERON:0000167!2.99e-11!6;UBERON:0000166!7.74e-10!21;UBERON:0000161!9.88e-09!35;UBERON:0000478!2.19e-08!24;UBERON:0004119!2.25e-08!169;UBERON:0000925!2.25e-08!169;UBERON:0006595!2.25e-08!169;UBERON:0001987!9.12e-08!4;UBERON:0004340!9.12e-08!4;UBERON:0000077!1.35e-07!130;UBERON:0006562!3.41e-07!11;UBERON:0000078!9.83e-07!18 | |ontology_enrichment_uberon=UBERON:0005631!1.34e-16!14;UBERON:0000158!1.34e-16!14;UBERON:0003408!4.90e-14!10;UBERON:0003124!2.21e-12!7;UBERON:0001044!2.99e-11!6;UBERON:0003293!2.99e-11!6;UBERON:0003294!2.99e-11!6;UBERON:0010047!2.99e-11!6;UBERON:0000167!2.99e-11!6;UBERON:0000166!7.74e-10!21;UBERON:0000161!9.88e-09!35;UBERON:0000478!2.19e-08!24;UBERON:0004119!2.25e-08!169;UBERON:0000925!2.25e-08!169;UBERON:0006595!2.25e-08!169;UBERON:0001987!9.12e-08!4;UBERON:0004340!9.12e-08!4;UBERON:0000077!1.35e-07!130;UBERON:0006562!3.41e-07!11;UBERON:0000078!9.83e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;6.40e-08;1!UBERON:0007029;6.40e-08;1!UBERON:0001736;6.40e-08;1!UBERON:0001961;6.40e-08;1!UBERON:0001744;6.40e-08;1!UBERON:0001042;6.40e-08;1!UBERON:0001735;6.40e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;6.40e-08;1!UBERON:0007029;6.40e-08;1!UBERON:0001736;6.40e-08;1!UBERON:0001961;6.40e-08;1!UBERON:0001744;6.40e-08;1!UBERON:0001042;6.40e-08;1!UBERON:0001735;6.40e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.83e-08,1;UBERON:0006298,3.83e-08,1;UBERON:0002372,4.11e-08,1;UBERON:0001961,4.11e-08,1;UBERON:0001744,4.11e-08,1;UBERON:0001735,4.11e-08,1;UBERON:0007029,6.63e-08,1 | |||
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| ||
|short_description=p1@uc011btt.1 | |short_description=p1@uc011btt.1 | ||
}} | }} |
Latest revision as of 19:48, 29 July 2015
Short description: | p1@uc011btt.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc011btt.1_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 51bp_to_uc011btt.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.42e-09 | 7 |
germ cell | 4.42e-09 | 7 |
epithelial cell of pancreas | 8.14e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 3.83e-08 | 1 |
submandibular gland primordium | 3.83e-08 | 1 |
tonsil | 4.11e-08 | 1 |
mucosa-associated lymphoid tissue | 4.11e-08 | 1 |
lymphoid tissue | 4.11e-08 | 1 |
tonsillar ring | 4.11e-08 | 1 |
surface | 6.63e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.35e-08 | 1 |
ischemia | 2.35e-08 | 1 |
extrinsic cardiomyopathy | 2.35e-08 | 1 |
myocardial ischemia | 2.35e-08 | 1 |
myocardial infarction | 2.35e-08 | 1 |
islet cell tumor | 4.40e-08 | 1 |
endocrine pancreas cancer | 4.40e-08 | 1 |
pancreatic endocrine carcinoma | 4.40e-08 | 1 |
chronic leukemia | 7.23e-08 | 8 |
pancreatic cancer | 8.14e-08 | 4 |