FFCP PHASE1:Hg19::chr3:30274089..30274100,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:30274089..30274100,- | |||
|coexpression_cluster_id=C199 | |coexpression_cluster_id=C199 | ||
|description=CAGE_peak_at_chr3:30274089..30274100,- | |description=CAGE_peak_at_chr3:30274089..30274100,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;2.04e-10;15!CL:0000125;2.04e-10;15!CL:0000095;1.99e-09;17!CL:0002319;6.43e-07;25 | |ontology_enrichment_celltype_v019=CL:0000243;2.04e-10;15!CL:0000125;2.04e-10;15!CL:0000095;1.99e-09;17!CL:0002319;6.43e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.04e-10,15;CL:0000125,2.04e-10,15;CL:0000030,2.04e-10,15;CL:0000339,2.04e-10,15;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0002319,6.43e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.62e-15;10!CL:0000339;2.04e-10;15 | |ontology_enrichment_development_v019=UBERON:0006238;1.62e-15;10!CL:0000339;2.04e-10;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.04e-20;8!DOID:3093;2.57e-14;11 | |ontology_enrichment_disease_v019=DOID:1036;1.04e-20;8!DOID:3093;2.57e-14;11 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.10e-20,8;DOID:3093,2.57e-14,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr3:30274089..30274100,- | |short_description=p@chr3:30274089..30274100,- | ||
}} | }} |
Latest revision as of 20:21, 29 July 2015
Short description: | p@chr3:30274089..30274100, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:30274089..30274100, - |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.04e-10 | 15 |
glial cell | 2.04e-10 | 15 |
glioblast | 2.04e-10 | 15 |
glioblast (sensu Vertebrata) | 2.04e-10 | 15 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
neural cell | 6.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.10e-20 | 8 |
nervous system cancer | 2.57e-14 | 11 |