FFCP PHASE1:Hg19::chr3:34262215..34262222,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:34262215..34262222,+ | |||
|coexpression_cluster_id=C1515 | |coexpression_cluster_id=C1515 | ||
|description=CAGE_peak_at_chr3:34262215..34262222,+ | |description=CAGE_peak_at_chr3:34262215..34262222,+ | ||
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|ontology_enrichment_celltype=CL:0002139!3.59e-15!24;CL:0000064!3.87e-15!3;CL:0005012!3.87e-15!3;CL:0000067!3.87e-15!3;CL:0002304!3.87e-15!3;CL:0005020!9.06e-14!6;CL:0002138!9.06e-14!6;CL:0005022!9.06e-14!6;CL:1000507!1.95e-10!12;CL:1000494!1.95e-10!12;CL:0000115!6.68e-10!35;CL:0002078!2.07e-09!44;CL:0002544!5.12e-08!6;CL:1000449!9.57e-08!16;CL:0002618!3.02e-07!3;CL:1000497!7.57e-07!18;CL:0002518!7.57e-07!18 | |ontology_enrichment_celltype=CL:0002139!3.59e-15!24;CL:0000064!3.87e-15!3;CL:0005012!3.87e-15!3;CL:0000067!3.87e-15!3;CL:0002304!3.87e-15!3;CL:0005020!9.06e-14!6;CL:0002138!9.06e-14!6;CL:0005022!9.06e-14!6;CL:1000507!1.95e-10!12;CL:1000494!1.95e-10!12;CL:0000115!6.68e-10!35;CL:0002078!2.07e-09!44;CL:0002544!5.12e-08!6;CL:1000449!9.57e-08!16;CL:0002618!3.02e-07!3;CL:1000497!7.57e-07!18;CL:0002518!7.57e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.22e-59;6!CL:0002139;6.13e-27;24!CL:0002545;6.30e-21;2!CL:0000115;1.46e-16;36!CL:0002078;1.91e-12;45!CL:0000213;9.45e-11;58!CL:0000215;9.45e-11;58!CL:0002544;7.01e-08;6 | |ontology_enrichment_celltype_v019=CL:0002138;1.22e-59;6!CL:0002139;6.13e-27;24!CL:0002545;6.30e-21;2!CL:0000115;1.46e-16;36!CL:0002078;1.91e-12;45!CL:0000213;9.45e-11;58!CL:0000215;9.45e-11;58!CL:0002544;7.01e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,9.96e-60,6;CL:0002138,9.96e-60,6;CL:0005022,9.96e-60,6;CL:0002139,5.93e-27,24;CL:0002545,6.96e-21,2;CL:0000115,3.00e-18,36;CL:0002078,9.38e-15,45;CL:0000213,1.31e-11,58;CL:0000215,1.31e-11,58;CL:0002544,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.22e-59;6 | |ontology_enrichment_development_v019=CL:0005022;1.22e-59;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr3:34262215..34262222,+ | |short_description=p@chr3:34262215..34262222,+ | ||
}} | }} |
Latest revision as of 20:34, 29 July 2015
Short description: | p@chr3:34262215..34262222, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:34262215..34262222, + |
Coexpression cluster: | C1515_Endothelial_schwannoma_Renal_cerebellum_lung_heart_diaphragm |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 9.96e-60 | 6 |
endothelial cell of lymphatic vessel | 9.96e-60 | 6 |
vascular lymphangioblast | 9.96e-60 | 6 |
endothelial cell of vascular tree | 5.93e-27 | 24 |
thoracic aorta endothelial cell | 6.96e-21 | 2 |
endothelial cell | 3.00e-18 | 36 |
meso-epithelial cell | 9.38e-15 | 45 |
lining cell | 1.31e-11 | 58 |
barrier cell | 1.31e-11 | 58 |
aortic endothelial cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.34e-45 | 8 |
lymph vasculature | 4.34e-45 | 8 |
lymphatic part of lymphoid system | 4.34e-45 | 8 |
lymphoid system | 2.70e-36 | 10 |
segment of aorta | 6.96e-21 | 2 |
thoracic aorta | 6.96e-21 | 2 |
vessel | 5.34e-10 | 68 |
right ovary | 2.97e-09 | 5 |
vasculature | 8.48e-09 | 78 |
vascular system | 8.48e-09 | 78 |