FFCP PHASE1:Hg19::chr3:55523106..55523111,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:55523106..55523111,- | |||
|description=CAGE_peak_at_chr3:55523106..55523111,- | |description=CAGE_peak_at_chr3:55523106..55523111,- | ||
|id=chr3:55523106..55523111,- | |id=chr3:55523106..55523111,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.32e-15;3!CL:0000138;2.17e-08;6!CL:0000327;3.15e-07;15!CL:0002536;8.52e-07;2!CL:0002367;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,8.44e-16,3;CL:0000058,2.71e-08,6;CL:0000138,2.71e-08,6;CL:0000327,3.66e-07,15;CL:0002536,9.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.46e-12;1 | |||
|ontology_enrichment_disease=DOID:2394!8.64e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3571;2.46e-12;1!DOID:3350;8.52e-07;2!DOID:4468;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.75e-12,1;DOID:4468,6.07e-07,2;DOID:3350,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.03e-08!95;UBERON:0002203!2.97e-08!6;UBERON:0001768!2.97e-08!6;UBERON:0005631!8.94e-08!14;UBERON:0000158!8.94e-08!14;UBERON:0001444!8.57e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.46e-12;1!UBERON:0001567;2.46e-12;1!UBERON:0001987;6.02e-12;4!UBERON:0001829;8.52e-07;2!UBERON:0005969;8.52e-07;2!UBERON:0004089;8.52e-07;2!UBERON:0003956;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,2.46e-12,1;UBERON:0001567,2.46e-12,1;UBERON:0008801,2.46e-12,1;UBERON:0001987,4.32e-12,4;UBERON:0004340,4.32e-12,4;UBERON:0005631,1.14e-07,14;UBERON:0000158,1.14e-07,14;UBERON:0003124,2.77e-07,7;UBERON:0001829,8.52e-07,2;UBERON:0004089,8.52e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.05506791291381,0,0.331397375727916,0,0,0,0,0.246242116153576,0.612002073732759,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,2.3858578411533,0.973269740605272,0.189069634328136,0.221729397462564,0.351339142772504,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.206651562351531,1.18800285728205,0.494533858557114,0,0,0.505008341862199,0,0,0.877955241761676,0,0.901428353439581,0.226864366320042,0.358779271377724,0.640672166455702,0.211931901159562,0,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0,0.252433774244115,0.368199594569197,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.545492241181669,0.860413786167011,0,0,0,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,2.01578553838631,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.21251028578504,1.66435439510497,0.604780586659361,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0.573645408816206,0.0982490410131212,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.993573058514948,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0.407992870545287,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0.226624183040251,0,0,0.129282956361551,0.26446520348538,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,6.74704668245407,0.310525913752519,0,0,1.04349012362347,0.150257608997218,0.380805212168795,0,0.181848659202559,0.751873899297419,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0.537266523244462,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0.619678821295011,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59775988689608,0,0,0,0,0,0,0,0,0.891139200981258,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0.788857810965923,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.372448285775147,0.33639558774184,0.0636471582781649,0,0,0,0.202056159043763,0,0,0.732629417498771,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.05506791291381,0,0.331397375727916,0,0,0,0,0.246242116153576,0.612002073732759,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,2.3858578411533,0.973269740605272,0.189069634328136,0.221729397462564,0.351339142772504,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.206651562351531,1.18800285728205,0.494533858557114,0,0,0.505008341862199,0,0,0.877955241761676,0,0.901428353439581,0.226864366320042,0.358779271377724,0.640672166455702,0.211931901159562,0,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0,0.252433774244115,0.368199594569197,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.545492241181669,0.860413786167011,0,0,0,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,2.01578553838631,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.21251028578504,1.66435439510497,0.604780586659361,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0.573645408816206,0.0982490410131212,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.993573058514948,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0.407992870545287,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0.226624183040251,0,0,0.129282956361551,0.26446520348538,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,6.74704668245407,0.310525913752519,0,0,1.04349012362347,0.150257608997218,0.380805212168795,0,0.181848659202559,0.751873899297419,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0.537266523244462,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0.619678821295011,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59775988689608,0,0,0,0,0,0,0,0,0.891139200981258,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0.788857810965923,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.372448285775147,0.33639558774184,0.0636471582781649,0,0,0,0.202056159043763,0,0,0.732629417498771,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p@chr3:55523106..55523111,- | |short_description=p@chr3:55523106..55523111,- | ||
}} | }} |
Latest revision as of 22:44, 29 July 2015
Short description: | p@chr3:55523106..55523111, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:55523106..55523111, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 8.44e-16 | 3 |
chondroblast | 2.71e-08 | 6 |
chondrocyte | 2.71e-08 | 6 |
extracellular matrix secreting cell | 3.66e-07 | 15 |
amniotic epithelial cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 2.46e-12 | 1 |
cheek | 2.46e-12 | 1 |
parotid gland primordium | 2.46e-12 | 1 |
placenta | 4.32e-12 | 4 |
allantois | 4.32e-12 | 4 |
extraembryonic membrane | 1.14e-07 | 14 |
membranous layer | 1.14e-07 | 14 |
chorion | 2.77e-07 | 7 |
major salivary gland | 8.52e-07 | 2 |
midface | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.75e-12 | 1 |
clear cell adenocarcinoma | 6.07e-07 | 2 |
mesenchymal cell neoplasm | 9.02e-07 | 2 |