FFCP PHASE1:Hg19::chr3:64448002..64448014,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:64448002..64448014,-
|short_description=p@chr3:64448002..64448014,-
|description=CAGE_peak_at_chr3:64448002..64448014,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:64448002..64448014,- | |||
|description=CAGE_peak_at_chr3:64448002..64448014,- | |||
|id=chr3:64448002..64448014,- | |||
|ontology_enrichment_celltype=CL:0000055!3.66e-25!180;CL:0000359!1.02e-19!32;CL:0000680!2.02e-15!57;CL:0000056!2.02e-15!57;CL:0000355!2.02e-15!57;CL:0000192!4.82e-15!42;CL:0000514!4.82e-15!42;CL:0000187!2.27e-14!54;CL:0000393!7.95e-13!60;CL:0000211!7.95e-13!60;CL:0000183!2.88e-12!59;CL:0000144!1.30e-11!625;CL:0002334!1.74e-10!12;CL:0000048!2.07e-10!430;CL:0002371!2.15e-10!591;CL:0000723!7.95e-10!436;CL:0000057!8.44e-10!75;CL:0000034!4.42e-09!444;CL:0000548!7.71e-09!679;CL:0000004!7.71e-09!679;CL:0000255!7.71e-09!679;CL:0000012!1.35e-08!682;CL:0000222!2.27e-08!119;CL:0002539!3.23e-08!10;CL:0002595!5.21e-07!5;CL:0000220!5.99e-07!246;CL:0002321!9.41e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002595;4.52e-14;5!CL:0000359;7.48e-08;32!CL:0000134;4.76e-07;55!CL:0002593;7.68e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,7.05e-14,5;CL:0000359,4.36e-08,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.75e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.29e-18;14!DOID:193;9.83e-10;29!DOID:120;1.29e-08;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.05e-18,14;DOID:193,8.88e-10,29;DOID:120,1.17e-08,27 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.69e-17!83;UBERON:0002329!1.69e-17!83;UBERON:0003077!1.69e-17!83;UBERON:0003059!1.69e-17!83;UBERON:0007282!1.69e-17!83;UBERON:0009618!1.69e-17!83;UBERON:0007285!1.69e-17!83;UBERON:0004290!3.00e-14!70;UBERON:0001134!1.14e-13!61;UBERON:0002036!1.14e-13!61;UBERON:0003082!1.14e-13!61;UBERON:0002385!6.96e-13!63;UBERON:0001015!6.96e-13!63;UBERON:0000383!6.96e-13!63;UBERON:0001637!8.01e-12!42;UBERON:0003509!8.01e-12!42;UBERON:0004572!8.01e-12!42;UBERON:0004573!2.56e-11!33;UBERON:0004571!2.56e-11!33;UBERON:0000486!3.76e-11!82;UBERON:0005256!1.62e-10!143;UBERON:0002049!1.54e-08!79;UBERON:0007798!1.54e-08!79;UBERON:0004237!3.23e-08!10;UBERON:0004695!3.23e-08!10;UBERON:0002111!3.23e-08!10;UBERON:0004178!3.23e-08!10;UBERON:0001981!3.52e-08!60;UBERON:0007500!3.52e-08!60;UBERON:0004537!3.52e-08!60;UBERON:0006965!3.52e-08!60;UBERON:0000992!5.99e-08!13;UBERON:0004535!4.12e-07!110;UBERON:0000490!4.80e-07!138;UBERON:0003834!5.21e-07!5;UBERON:0001533!5.21e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;4.52e-14;5!UBERON:0001533;4.52e-14;5!UBERON:0002119;3.33e-11;4!UBERON:0000992;5.22e-10;13!UBERON:0003513;6.06e-10;7!UBERON:0002456;7.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,7.05e-14,5;UBERON:0001533,7.05e-14,5;UBERON:0002119,1.82e-11,4;UBERON:0000992,3.67e-10,13;UBERON:0003513,8.25e-10,7 | |||
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| ||
|short_description=p@chr3:64448002..64448014,- | |||
}} | }} |
Latest revision as of 23:12, 29 July 2015
Short description: | p@chr3:64448002..64448014, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:64448002..64448014, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 7.05e-14 | 5 |
vascular associated smooth muscle cell | 4.36e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 7.05e-14 | 5 |
subclavian artery | 7.05e-14 | 5 |
left ovary | 1.82e-11 | 4 |
female gonad | 3.67e-10 | 13 |
trunk blood vessel | 8.25e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.05e-18 | 14 |
reproductive organ cancer | 8.88e-10 | 29 |
female reproductive organ cancer | 1.17e-08 | 27 |