FFCP PHASE1:Hg19::chr3:64547432..64547444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:64547432..64547444,- | |||
|coexpression_cluster_id=C3337 | |coexpression_cluster_id=C3337 | ||
|description=CAGE_peak_at_chr3:64547432..64547444,- | |description=CAGE_peak_at_chr3:64547432..64547444,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000064!4.66e-22!3;CL:0005012!4.66e-22!3;CL:0000067!4.66e-22!3;CL:0002304!4.66e-22!3 | |ontology_enrichment_celltype=CL:0000064!4.66e-22!3;CL:0005012!4.66e-22!3;CL:0000067!4.66e-22!3;CL:0002304!4.66e-22!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.04e-10;3!CL:0000067;1.04e-10;3!CL:0005012;1.04e-10;3!CL:0002304;1.04e-10;3 | |ontology_enrichment_celltype_v019=CL:0000064;1.04e-10;3!CL:0000067;1.04e-10;3!CL:0005012;1.04e-10;3!CL:0002304;1.04e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.20e-10,3;CL:0000067,1.20e-10,3;CL:0005012,1.20e-10,3;CL:0002304,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.33e-29;1!UBERON:0003918;1.89e-12;10!UBERON:0007687;1.89e-12;10!UBERON:0003056;1.04e-10;3!UBERON:0003104;2.97e-09;31 | |ontology_enrichment_development_v019=UBERON:0000358;1.33e-29;1!UBERON:0003918;1.89e-12;10!UBERON:0007687;1.89e-12;10!UBERON:0003056;1.04e-10;3!UBERON:0003104;2.97e-09;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!4.66e-22!3;UBERON:0001775!4.66e-22!3;UBERON:0000488!1.07e-16!4;UBERON:0000970!2.02e-12!20;UBERON:0002104!8.33e-12!21;UBERON:0002203!2.57e-11!6;UBERON:0001768!2.57e-11!6;UBERON:0000020!9.79e-11!23;UBERON:0007625!1.52e-10!11;UBERON:0001032!2.88e-10!24;UBERON:0004456!2.88e-10!24;UBERON:0000019!2.65e-09!19;UBERON:0000047!2.65e-09!19;UBERON:0004088!2.65e-09!19;UBERON:0003072!2.65e-09!19;UBERON:0003071!2.65e-09!19;UBERON:0004128!2.65e-09!19;UBERON:0001000!7.56e-09!1;UBERON:0005352!7.56e-09!1;UBERON:0007029!1.27e-08!1;UBERON:0006834!1.71e-08!1;UBERON:0001456!2.14e-08!21;UBERON:0001801!2.58e-08!14;UBERON:0007023!5.05e-08!115 | |ontology_enrichment_uberon=UBERON:0001778!4.66e-22!3;UBERON:0001775!4.66e-22!3;UBERON:0000488!1.07e-16!4;UBERON:0000970!2.02e-12!20;UBERON:0002104!8.33e-12!21;UBERON:0002203!2.57e-11!6;UBERON:0001768!2.57e-11!6;UBERON:0000020!9.79e-11!23;UBERON:0007625!1.52e-10!11;UBERON:0001032!2.88e-10!24;UBERON:0004456!2.88e-10!24;UBERON:0000019!2.65e-09!19;UBERON:0000047!2.65e-09!19;UBERON:0004088!2.65e-09!19;UBERON:0003072!2.65e-09!19;UBERON:0003071!2.65e-09!19;UBERON:0004128!2.65e-09!19;UBERON:0001000!7.56e-09!1;UBERON:0005352!7.56e-09!1;UBERON:0007029!1.27e-08!1;UBERON:0006834!1.71e-08!1;UBERON:0001456!2.14e-08!21;UBERON:0001801!2.58e-08!14;UBERON:0007023!5.05e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.73e-29;1!UBERON:0005352;2.73e-29;1!UBERON:0001778;1.04e-10;3!UBERON:0006947;1.04e-10;3!UBERON:0001775;1.04e-10;3!UBERON:0004054;1.04e-10;3!UBERON:0005904;2.35e-08;4!UBERON:0000488;2.35e-08;4!UBERON:0000966;6.21e-07;5!UBERON:0005388;6.21e-07;5!UBERON:0001802;6.21e-07;5!UBERON:0000019;6.77e-07;19!UBERON:0000047;6.77e-07;19!UBERON:0004088;6.77e-07;19!UBERON:0010230;6.77e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0001000;2.73e-29;1!UBERON:0005352;2.73e-29;1!UBERON:0001778;1.04e-10;3!UBERON:0006947;1.04e-10;3!UBERON:0001775;1.04e-10;3!UBERON:0004054;1.04e-10;3!UBERON:0005904;2.35e-08;4!UBERON:0000488;2.35e-08;4!UBERON:0000966;6.21e-07;5!UBERON:0005388;6.21e-07;5!UBERON:0001802;6.21e-07;5!UBERON:0000019;6.77e-07;19!UBERON:0000047;6.77e-07;19!UBERON:0004088;6.77e-07;19!UBERON:0010230;6.77e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,2.37e-29,1;UBERON:0005352,2.37e-29,1;UBERON:0006947,9.90e-11,3;UBERON:0004054,9.90e-11,3;UBERON:0001778,1.20e-10,3;UBERON:0001775,1.20e-10,3;UBERON:0005904,2.26e-08,4;UBERON:0000488,2.61e-08,4 | |||
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|short_description=p@chr3:64547432..64547444,- | |short_description=p@chr3:64547432..64547444,- | ||
}} | }} |
Latest revision as of 23:12, 29 July 2015
Short description: | p@chr3:64547432..64547444, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:64547432..64547444, - |
Coexpression cluster: | C3337_kidney_umbilical_retina_putamen_Ciliary_brain_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.20e-10 | 3 |
ciliated epithelial cell | 1.20e-10 | 3 |
multi-ciliated epithelial cell | 1.20e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 2.37e-29 | 1 |
spermatic cord | 2.37e-29 | 1 |
male genital duct | 9.90e-11 | 3 |
internal male genitalia | 9.90e-11 | 3 |
ciliary epithelium | 1.20e-10 | 3 |
ciliary body | 1.20e-10 | 3 |
duct of male reproductive system | 2.26e-08 | 4 |
atypical epithelium | 2.61e-08 | 4 |