FFCP PHASE1:Hg19::chr3:8930031..8930036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:8930031..8930036,- | |||
|description=CAGE_peak_at_chr3:8930031..8930036,- | |description=CAGE_peak_at_chr3:8930031..8930036,- | ||
|id=chr3:8930031..8930036,- | |id=chr3:8930031..8930036,- | ||
|ontology_enrichment_celltype=CL:0000055!1.30e-19!180;CL:0000057!5.76e-17!75;CL:0002620!9.69e-14!23;CL:0000144!1.05e-11!625;CL:0000548!1.49e-09!679;CL:0000004!1.49e-09!679;CL:0000255!1.49e-09!679;CL:0000077!2.19e-09!19;CL:0000012!2.22e-09!682;CL:0002334!2.38e-08!12;CL:0002371!4.82e-08!591;CL:0000680!1.26e-07!57;CL:0000056!1.26e-07!57;CL:0000355!1.26e-07!57;CL:0000222!1.81e-07!119;CL:0000003!3.39e-07!722;CL:0000349!8.64e-07!3;CL:0002577!8.64e-07!3;CL:0000048!8.82e-07!430 | |ontology_enrichment_celltype=CL:0000055!1.30e-19!180;CL:0000057!5.76e-17!75;CL:0002620!9.69e-14!23;CL:0000144!1.05e-11!625;CL:0000548!1.49e-09!679;CL:0000004!1.49e-09!679;CL:0000255!1.49e-09!679;CL:0000077!2.19e-09!19;CL:0000012!2.22e-09!682;CL:0002334!2.38e-08!12;CL:0002371!4.82e-08!591;CL:0000680!1.26e-07!57;CL:0000056!1.26e-07!57;CL:0000355!1.26e-07!57;CL:0000222!1.81e-07!119;CL:0000003!3.39e-07!722;CL:0000349!8.64e-07!3;CL:0002577!8.64e-07!3;CL:0000048!8.82e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000346;3.41e-11;3!CL:1000428;3.41e-11;3!CL:0002577;3.41e-11;3!CL:0002581;1.88e-09;1!CL:0000511;5.09e-09;1!CL:0002625;5.09e-09;1!CL:0000228;5.09e-09;1!CL:0000216;5.09e-09;1!CL:0002372;5.09e-09;1!CL:0002616;5.09e-09;1!CL:0002620;3.47e-08;23!CL:0002559;4.69e-07;5 | |ontology_enrichment_celltype_v019=CL:0000346;3.41e-11;3!CL:1000428;3.41e-11;3!CL:0002577;3.41e-11;3!CL:0002581;1.88e-09;1!CL:0000511;5.09e-09;1!CL:0002625;5.09e-09;1!CL:0000228;5.09e-09;1!CL:0000216;5.09e-09;1!CL:0002372;5.09e-09;1!CL:0002616;5.09e-09;1!CL:0002620;3.47e-08;23!CL:0002559;4.69e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.26e-11,3;CL:0000346,3.42e-11,3;CL:1000428,3.42e-11,3;CL:0002581,1.74e-09,1;CL:0002616,2.82e-09,1;CL:0000511,3.58e-09,1;CL:0002625,3.58e-09,1;CL:0000216,3.58e-09,1;CL:0000228,4.91e-09,1;CL:0002372,4.91e-09,1;CL:0000057,1.63e-08,76;CL:0002620,3.62e-08,23;CL:0002559,4.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.88e-09;1 | |ontology_enrichment_development_v019=UBERON:0000358;1.88e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!4.67e-11!40;UBERON:0003688!9.93e-11!6;UBERON:0002358!9.93e-11!6;UBERON:0003684!9.93e-11!6;UBERON:0001178!9.93e-11!6;UBERON:0004923!2.53e-10!57;UBERON:0002199!2.62e-10!45;UBERON:0002416!2.62e-10!45;UBERON:0003124!3.62e-09!7;UBERON:0005631!5.23e-09!14;UBERON:0000158!5.23e-09!14;UBERON:0004290!1.79e-08!70;UBERON:0000914!1.36e-07!83;UBERON:0002329!1.36e-07!83;UBERON:0003077!1.36e-07!83;UBERON:0003059!1.36e-07!83;UBERON:0007282!1.36e-07!83;UBERON:0009618!1.36e-07!83;UBERON:0007285!1.36e-07!83;UBERON:0000475!3.16e-07!365;UBERON:0000486!4.90e-07!82;UBERON:0000478!5.67e-07!24;UBERON:0001134!8.67e-07!61;UBERON:0002036!8.67e-07!61;UBERON:0003082!8.67e-07!61 | |ontology_enrichment_uberon=UBERON:0002097!4.67e-11!40;UBERON:0003688!9.93e-11!6;UBERON:0002358!9.93e-11!6;UBERON:0003684!9.93e-11!6;UBERON:0001178!9.93e-11!6;UBERON:0004923!2.53e-10!57;UBERON:0002199!2.62e-10!45;UBERON:0002416!2.62e-10!45;UBERON:0003124!3.62e-09!7;UBERON:0005631!5.23e-09!14;UBERON:0000158!5.23e-09!14;UBERON:0004290!1.79e-08!70;UBERON:0000914!1.36e-07!83;UBERON:0002329!1.36e-07!83;UBERON:0003077!1.36e-07!83;UBERON:0003059!1.36e-07!83;UBERON:0007282!1.36e-07!83;UBERON:0009618!1.36e-07!83;UBERON:0007285!1.36e-07!83;UBERON:0000475!3.16e-07!365;UBERON:0000486!4.90e-07!82;UBERON:0000478!5.67e-07!24;UBERON:0001134!8.67e-07!61;UBERON:0002036!8.67e-07!61;UBERON:0003082!8.67e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;9.57e-17;2!UBERON:0000412;3.41e-11;3!UBERON:0001992;3.41e-11;3!UBERON:0001136;5.09e-09;1!UBERON:0001343;5.09e-09;1!UBERON:0004910;5.09e-09;1!UBERON:0004813;5.09e-09;1!UBERON:0001987;1.30e-08;4!UBERON:0002073;4.69e-07;5!UBERON:0002097;5.59e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0005406;9.57e-17;2!UBERON:0000412;3.41e-11;3!UBERON:0001992;3.41e-11;3!UBERON:0001136;5.09e-09;1!UBERON:0001343;5.09e-09;1!UBERON:0004910;5.09e-09;1!UBERON:0004813;5.09e-09;1!UBERON:0001987;1.30e-08;4!UBERON:0002073;4.69e-07;5!UBERON:0002097;5.59e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,4.91e-17,2;UBERON:0000412,3.42e-11,3;UBERON:0001992,3.42e-11,3;UBERON:0001136,3.58e-09,1;UBERON:0001343,3.58e-09,1;UBERON:0004910,3.58e-09,1;UBERON:0005154,3.58e-09,1;UBERON:0005295,3.58e-09,1;UBERON:0004813,3.58e-09,1;UBERON:0005297,3.58e-09,1;UBERON:0005294,3.58e-09,1;UBERON:0010141,3.58e-09,1;UBERON:0005891,3.58e-09,1;UBERON:0001987,9.56e-09,4;UBERON:0004340,9.56e-09,4;UBERON:0002097,2.32e-08,41;UBERON:0002199,2.29e-07,46;UBERON:0002416,2.29e-07,46;UBERON:0002073,4.70e-07,5;UBERON:0005086,4.70e-07,5 | |||
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|short_description=p@chr3:8930031..8930036,- | |short_description=p@chr3:8930031..8930036,- | ||
}} | }} |
Latest revision as of 23:52, 29 July 2015
Short description: | p@chr3:8930031..8930036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:8930031..8930036, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.26e-11 | 3 |
hair follicle dermal papilla cell | 3.42e-11 | 3 |
stem cell of epidermis | 3.42e-11 | 3 |
perirenal preadipocyte | 1.74e-09 | 1 |
perirenal adipocyte cell | 2.82e-09 | 1 |
androgen binding protein secreting cell | 3.58e-09 | 1 |
seminiferous tubule epithelial cell | 3.58e-09 | 1 |
Sertoli cell | 3.58e-09 | 1 |
multinucleate cell | 4.91e-09 | 1 |
myotube | 4.91e-09 | 1 |
fibroblast | 1.63e-08 | 76 |
skin fibroblast | 3.62e-08 | 23 |
hair follicle cell | 4.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 4.91e-17 | 2 |
dermal papilla | 3.42e-11 | 3 |
papillary layer of dermis | 3.42e-11 | 3 |
mesothelium | 3.58e-09 | 1 |
seminiferous tubule of testis | 3.58e-09 | 1 |
epithelium of male gonad | 3.58e-09 | 1 |
epithelial cord | 3.58e-09 | 1 |
sex cord | 3.58e-09 | 1 |
seminiferous tubule epithelium | 3.58e-09 | 1 |
testis sex cord | 3.58e-09 | 1 |
genital ridge | 3.58e-09 | 1 |
primitive sex cord of indifferent gonad | 3.58e-09 | 1 |
coelomic epithelium | 3.58e-09 | 1 |
placenta | 9.56e-09 | 4 |
allantois | 9.56e-09 | 4 |
skin of body | 2.32e-08 | 41 |
integument | 2.29e-07 | 46 |
integumental system | 2.29e-07 | 46 |
hair follicle | 4.70e-07 | 5 |
hair follicle placode | 4.70e-07 | 5 |