FFCP PHASE1:Hg19::chr3:99354394..99354405,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:99354394..99354405,+ | |||
|description=CAGE_peak_at_chr3:99354394..99354405,+ | |description=CAGE_peak_at_chr3:99354394..99354405,+ | ||
|id=chr3:99354394..99354405,+ | |id=chr3:99354394..99354405,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.44e-07!75;CL:0002620!1.67e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.44e-07!75;CL:0002620!1.67e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002616;2.30e-21;1!CL:0002580;6.78e-08;3!CL:0002579;6.78e-08;3!CL:0002334;1.57e-07;12!CL:0000057;8.08e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,2.30e-21,1;CL:0002580,5.93e-08,3;CL:0002579,8.29e-08,3;CL:0002334,1.62e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0010115;5.16e-21;1!UBERON:0006965;1.82e-11;2!UBERON:0006241;4.84e-08;3!UBERON:0003057;4.84e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.90e-10!365;UBERON:0003688!1.30e-07!6;UBERON:0002358!1.30e-07!6;UBERON:0003684!1.30e-07!6;UBERON:0001178!1.30e-07!6;UBERON:0002100!7.15e-07!216;UBERON:0009569!8.99e-07!113 | |ontology_enrichment_uberon=UBERON:0000475!8.90e-10!365;UBERON:0003688!1.30e-07!6;UBERON:0002358!1.30e-07!6;UBERON:0003684!1.30e-07!6;UBERON:0001178!1.30e-07!6;UBERON:0002100!7.15e-07!216;UBERON:0009569!8.99e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;5.16e-21;1!UBERON:0005406;2.23e-11;2!UBERON:0002360;3.34e-11;2!UBERON:0000094;3.34e-11;2!UBERON:0010743;3.34e-11;2!UBERON:0002240;4.84e-08;3!UBERON:0005174;4.84e-08;3!UBERON:0001137;4.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,2.82e-21,1;UBERON:0007645,2.82e-21,1;UBERON:0007647,2.82e-21,1;UBERON:0010115,2.82e-21,1;UBERON:0005406,2.23e-11,2;UBERON:0002360,2.47e-11,2;UBERON:0000094,2.47e-11,2;UBERON:0010743,2.47e-11,2;UBERON:0002240,4.84e-08,3;UBERON:0005174,4.84e-08,3;UBERON:0001137,4.84e-08,3 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.845726424575827,0,0.446961094427288,2.61701557230111,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.538168907066586,0.640672166455702,0,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,0,0.460249493211497,0,1.42003837006646,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,1.53461973288062,0,0,1.02341449813341,0.64341568457443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0.608731130888112,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,4.78195171802567,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0,0,0.480952921509202,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,3.3812458206672,0.169927114687817,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.726713517082227,0.214100523890983,0.845726424575827,0,0.446961094427288,2.61701557230111,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.538168907066586,0.640672166455702,0,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,0,0.460249493211497,0,1.42003837006646,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,1.53461973288062,0,0,1.02341449813341,0.64341568457443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0.608731130888112,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,4.78195171802567,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0,0,0.480952921509202,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,3.3812458206672,0.169927114687817,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:99354394..99354405,+ | |short_description=p@chr3:99354394..99354405,+ | ||
}} | }} |
Latest revision as of 00:11, 30 July 2015
Short description: | p@chr3:99354394..99354405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:99354394..99354405, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 2.30e-21 | 1 |
preadipocyte of the breast | 5.93e-08 | 3 |
omentum preadipocyte | 8.29e-08 | 3 |
preadipocyte | 1.62e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
dura mater | 2.82e-21 | 1 |
future meninx | 2.82e-21 | 1 |
ectomeninx | 2.82e-21 | 1 |
future dura mater | 2.82e-21 | 1 |
perirenal fat | 2.23e-11 | 2 |
meninx | 2.47e-11 | 2 |
membrane organ | 2.47e-11 | 2 |
meningeal cluster | 2.47e-11 | 2 |
spinal cord | 4.84e-08 | 3 |
dorsal region element | 4.84e-08 | 3 |
dorsum | 4.84e-08 | 3 |