FFCP PHASE1:Hg19::chr3:99508295..99508310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:99508295..99508310,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr3:99508295..99508310,- | |description=CAGE_peak_at_chr3:99508295..99508310,- | ||
|id=chr3:99508295..99508310,- | |id=chr3:99508295..99508310,- | ||
|ontology_enrichment_celltype=CL:0000136!1.01e-11!15;CL:0000055!5.37e-09!180;CL:0002579!3.50e-08!3;CL:0002620!5.82e-08!23;CL:0002580!7.03e-08!3;CL:0000057!3.31e-07!75;CL:0000064!5.89e-07!3;CL:0005012!5.89e-07!3;CL:0000067!5.89e-07!3;CL:0002304!5.89e-07!3;CL:0002334!9.78e-07!12 | |ontology_enrichment_celltype=CL:0000136!1.01e-11!15;CL:0000055!5.37e-09!180;CL:0002579!3.50e-08!3;CL:0002620!5.82e-08!23;CL:0002580!7.03e-08!3;CL:0000057!3.31e-07!75;CL:0000064!5.89e-07!3;CL:0005012!5.89e-07!3;CL:0000067!5.89e-07!3;CL:0002304!5.89e-07!3;CL:0002334!9.78e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.40e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.87e-09,15;CL:0000057,1.22e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.90e-11!5;DOID:450!1.90e-11!5;DOID:66!1.90e-11!5;DOID:423!1.90e-11!5;DOID:0080000!1.90e-11!5;DOID:11722!1.90e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:3371;5.55e-16;1!DOID:4549;5.55e-16;1!DOID:5861;5.55e-16;1!DOID:6496;5.55e-16;1!DOID:17;2.82e-12;5!DOID:450;2.82e-12;5!DOID:66;2.82e-12;5!DOID:423;2.82e-12;5!DOID:0080000;2.82e-12;5!DOID:11722;2.82e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.56e-16,1;DOID:4549,5.56e-16,1;DOID:5861,5.56e-16,1;DOID:6496,5.56e-16,1;DOID:17,2.38e-12,5;DOID:450,2.38e-12,5;DOID:66,2.38e-12,5;DOID:423,2.38e-12,5;DOID:0080000,2.38e-12,5;DOID:11722,2.38e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0001778!5.89e-07!3;UBERON:0001775!5.89e-07!3;UBERON:0003688!5.91e-07!6;UBERON:0002358!5.91e-07!6;UBERON:0003684!5.91e-07!6;UBERON:0001178!5.91e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.61e-10;6!UBERON:0002358;1.61e-10;6!UBERON:0003684;1.61e-10;6!UBERON:0001178;1.61e-10;6!UBERON:0004457;2.64e-07;9!UBERON:0000042;2.64e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.73e-10,6;UBERON:0002358,1.73e-10,6;UBERON:0003684,1.73e-10,6;UBERON:0001178,1.73e-10,6 | |||
|phase1_expression=0.54503513781167,0.642301571672949,2.39622486963151,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0,0,0,0,0,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,1.92201649936711,1.27159140695737,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.389748020644795,0.252433774244115,1.38074847963449,0,0,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.73675465473144,0.306923946576125,0.561320188866147,1.28139149255701,0.511707249066704,0.965123526861645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.732555718546747,1.07262349896764,0,0,0,0,0,0,0,0,0.435050081742686,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10939738410511,0,0,0.0870592065804026,0,0,0,0,0,0,13.238419003725,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,0.5013797880454,2.75711019087115,0.983617892129413,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0,0.800055529326307,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0.54503513781167,0.642301571672949,2.39622486963151,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0,0,0,0,0,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,1.92201649936711,1.27159140695737,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.389748020644795,0.252433774244115,1.38074847963449,0,0,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.73675465473144,0.306923946576125,0.561320188866147,1.28139149255701,0.511707249066704,0.965123526861645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.732555718546747,1.07262349896764,0,0,0,0,0,0,0,0,0.435050081742686,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10939738410511,0,0,0.0870592065804026,0,0,0,0,0,0,13.238419003725,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,0.5013797880454,2.75711019087115,0.983617892129413,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0,0.800055529326307,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr3:99508295..99508310,- | |short_description=p@chr3:99508295..99508310,- | ||
}} | }} |
Latest revision as of 00:12, 30 July 2015
Short description: | p@chr3:99508295..99508310, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:99508295..99508310, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.87e-09 | 15 |
fibroblast | 1.22e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.73e-10 | 6 |
peritoneum | 1.73e-10 | 6 |
abdominal cavity | 1.73e-10 | 6 |
visceral peritoneum | 1.73e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.56e-16 | 1 |
extraosseous chondrosarcoma | 5.56e-16 | 1 |
myxoid chondrosarcoma | 5.56e-16 | 1 |
extraskeletal myxoid chondrosarcoma | 5.56e-16 | 1 |
musculoskeletal system disease | 2.38e-12 | 5 |
myotonic disease | 2.38e-12 | 5 |
muscle tissue disease | 2.38e-12 | 5 |
myopathy | 2.38e-12 | 5 |
muscular disease | 2.38e-12 | 5 |
myotonic dystrophy | 2.38e-12 | 5 |