FFCP PHASE1:Hg19::chr4:100228461..100228472,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:100228461..100228472,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr4:100228461..100228472,- | |description=CAGE_peak_at_chr4:100228461..100228472,- | ||
|id=chr4:100228461..100228472,- | |id=chr4:100228461..100228472,- | ||
|ontology_enrichment_celltype=CL:0000136!7.46e-23!15;CL:0002617!5.48e-08!2;CL:0002602!6.53e-08!2;CL:0000325!1.63e-07!39 | |ontology_enrichment_celltype=CL:0000136!7.46e-23!15;CL:0002617!5.48e-08!2;CL:0002602!6.53e-08!2;CL:0000325!1.63e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.40e-27;13!CL:0002521;5.91e-20;3!CL:0002581;2.95e-15;1!CL:0000182;2.40e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.34e-23,15;CL:0002521,4.88e-20,3;CL:0002581,2.75e-15,1;CL:0000182,2.36e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.78e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.81e-12!115;UBERON:0009568!6.53e-08!2;UBERON:0002216!6.53e-08!2;UBERON:0002209!6.53e-08!2;UBERON:0002213!6.53e-08!2;UBERON:0004267!6.53e-08!2;UBERON:0006444!6.53e-08!2;UBERON:0001995!6.53e-08!2;UBERON:0004715!6.53e-08!2;UBERON:0001468!6.53e-08!2;UBERON:0001130!6.53e-08!2;UBERON:0001066!6.53e-08!2 | |ontology_enrichment_uberon=UBERON:0007023!2.81e-12!115;UBERON:0009568!6.53e-08!2;UBERON:0002216!6.53e-08!2;UBERON:0002209!6.53e-08!2;UBERON:0002213!6.53e-08!2;UBERON:0004267!6.53e-08!2;UBERON:0006444!6.53e-08!2;UBERON:0001995!6.53e-08!2;UBERON:0004715!6.53e-08!2;UBERON:0001468!6.53e-08!2;UBERON:0001130!6.53e-08!2;UBERON:0001066!6.53e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;5.91e-20;3!UBERON:0002107;2.15e-12;19!UBERON:0006925;2.15e-12;19!UBERON:0002072;2.25e-12;5!UBERON:0001013;1.06e-09;14!UBERON:0002423;1.75e-09;25!UBERON:0005406;2.77e-08;2!UBERON:0002365;6.13e-08;31!UBERON:0002330;6.13e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,4.88e-20,3;UBERON:0002072,2.00e-12,5;UBERON:0002107,2.12e-12,19;UBERON:0006925,2.12e-12,19;UBERON:0008836,2.12e-12,19;UBERON:0008835,9.53e-11,22;UBERON:0003894,9.53e-11,22;UBERON:0009854,2.72e-10,23;UBERON:0001013,9.81e-10,14;UBERON:0007499,1.73e-09,25;UBERON:0009497,1.73e-09,25;UBERON:0000015,1.73e-09,25;UBERON:0002423,1.73e-09,25;UBERON:0006235,1.73e-09,25;UBERON:0004161,1.73e-09,25;UBERON:0009856,3.93e-09,26;UBERON:0005406,2.67e-08,2;UBERON:0002365,1.08e-07,31;UBERON:0002330,1.08e-07,31;UBERON:0002368,7.77e-07,35 | |||
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| ||
|short_description=p@chr4:100228461..100228472,- | |short_description=p@chr4:100228461..100228472,- | ||
}} | }} |
Latest revision as of 00:17, 30 July 2015
Short description: | p@chr4:100228461..100228472, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:100228461..100228472, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.34e-23 | 15 |
subcutaneous fat cell | 4.88e-20 | 3 |
perirenal preadipocyte | 2.75e-15 | 1 |
hepatocyte | 2.36e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 4.88e-20 | 3 |
hypodermis | 2.00e-12 | 5 |
liver | 2.12e-12 | 19 |
digestive gland | 2.12e-12 | 19 |
liver bud | 2.12e-12 | 19 |
hepatic diverticulum | 9.53e-11 | 22 |
liver primordium | 9.53e-11 | 22 |
digestive tract diverticulum | 2.72e-10 | 23 |
adipose tissue | 9.81e-10 | 14 |
epithelial sac | 1.73e-09 | 25 |
epithelium of foregut-midgut junction | 1.73e-09 | 25 |
anatomical boundary | 1.73e-09 | 25 |
hepatobiliary system | 1.73e-09 | 25 |
foregut-midgut junction | 1.73e-09 | 25 |
septum transversum | 1.73e-09 | 25 |
sac | 3.93e-09 | 26 |
perirenal fat | 2.67e-08 | 2 |
exocrine gland | 1.08e-07 | 31 |
exocrine system | 1.08e-07 | 31 |
endocrine gland | 7.77e-07 | 35 |