FFCP PHASE1:Hg19::chr4:111540901..111540905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:111540901..111540905,+ | |||
|coexpression_cluster_id=C425 | |||
|description=CAGE_peak_at_chr4:111540901..111540905,+ | |description=CAGE_peak_at_chr4:111540901..111540905,+ | ||
|id=chr4:111540901..111540905,+ | |id=chr4:111540901..111540905,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.15e-36!5;CL:0002594!1.83e-29!4;CL:0002367!6.29e-16!2;CL:0000540!2.58e-12!6;CL:0000031!2.58e-12!6;CL:0000404!2.58e-12!6;CL:0000047!2.35e-09!8;CL:0002568!1.22e-08!1;CL:0002550!1.53e-08!1;CL:0000148!3.49e-07!10;CL:0000541!3.49e-07!10;CL:0000393!6.16e-07!60;CL:0000211!6.16e-07!60 | |ontology_enrichment_celltype=CL:0002322!1.15e-36!5;CL:0002594!1.83e-29!4;CL:0002367!6.29e-16!2;CL:0000540!2.58e-12!6;CL:0000031!2.58e-12!6;CL:0000404!2.58e-12!6;CL:0000047!2.35e-09!8;CL:0002568!1.22e-08!1;CL:0002550!1.53e-08!1;CL:0000148!3.49e-07!10;CL:0000541!3.49e-07!10;CL:0000393!6.16e-07!60;CL:0000211!6.16e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.49e-59;6!CL:0000404;1.49e-59;6!CL:0002319;5.18e-14;25!CL:0002322;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-59,6;CL:0000031,1.22e-59,6;CL:0000404,1.22e-59,6;CL:0000047,5.04e-45,8;CL:0002319,4.96e-14,25;CL:0000133,4.65e-11,59;CL:0000221,3.13e-09,72;CL:0002322,3.49e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.49e-59;6!CL:0000133;1.96e-07;59 | |||
|ontology_enrichment_disease=DOID:5662!2.22e-08!1 | |ontology_enrichment_disease=DOID:5662!2.22e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!1.83e-29!4;UBERON:0005969!6.29e-16!2;UBERON:0003956!6.29e-16!2;UBERON:0002135!1.13e-08!1 | |ontology_enrichment_uberon=UBERON:0001310!1.83e-29!4;UBERON:0005969!6.29e-16!2;UBERON:0003956!6.29e-16!2;UBERON:0002135!1.13e-08!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:111540901..111540905,+ | |short_description=p@chr4:111540901..111540905,+ | ||
}} | }} |
Latest revision as of 00:55, 30 July 2015
Short description: | p@chr4:111540901..111540905, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:111540901..111540905, + |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.22e-59 | 6 |
neuroblast | 1.22e-59 | 6 |
electrically signaling cell | 1.22e-59 | 6 |
neuronal stem cell | 5.04e-45 | 8 |
neural cell | 4.96e-14 | 25 |
neurectodermal cell | 4.65e-11 | 59 |
ectodermal cell | 3.13e-09 | 72 |
embryonic stem cell | 3.49e-09 | 5 |