FFCP PHASE1:Hg19::chr4:112437251..112437278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:112437251..112437278,+ | |||
|description=CAGE_peak_at_chr4:112437251..112437278,+ | |description=CAGE_peak_at_chr4:112437251..112437278,+ | ||
|id=chr4:112437251..112437278,+ | |id=chr4:112437251..112437278,+ | ||
|ontology_enrichment_celltype=CL:0002334!6.34e-44!12;CL:0000057!4.96e-19!75;CL:0002579!8.57e-18!3;CL:0002580!9.06e-18!3;CL:0000136!1.47e-12!15;CL:1000306!2.88e-12!4;CL:0002547!2.88e-12!4;CL:0002570!1.18e-10!8;CL:0000055!1.98e-10!180;CL:0002615!2.07e-08!3;CL:0000135!3.95e-08!3;CL:0000386!3.95e-08!3;CL:0000388!3.95e-08!3;CL:0002582!1.02e-07!3;CL:0000048!6.07e-07!430;CL:0002581!6.43e-07!1;CL:0002616!8.49e-07!1;CL:0000723!9.35e-07!436 | |ontology_enrichment_celltype=CL:0002334!6.34e-44!12;CL:0000057!4.96e-19!75;CL:0002579!8.57e-18!3;CL:0002580!9.06e-18!3;CL:0000136!1.47e-12!15;CL:1000306!2.88e-12!4;CL:0002547!2.88e-12!4;CL:0002570!1.18e-10!8;CL:0000055!1.98e-10!180;CL:0002615!2.07e-08!3;CL:0000135!3.95e-08!3;CL:0000386!3.95e-08!3;CL:0000388!3.95e-08!3;CL:0002582!1.02e-07!3;CL:0000048!6.07e-07!430;CL:0002581!6.43e-07!1;CL:0002616!8.49e-07!1;CL:0000723!9.35e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.55e-73;12!CL:0002580;5.49e-55;3!CL:0002579;5.49e-55;3!CL:0002615;1.07e-24;3!CL:0002581;3.57e-19;1!CL:0000136;5.72e-13;13!CL:0002617;3.42e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.69e-73,12;CL:0002579,5.01e-55,3;CL:0002580,6.02e-55,3;CL:0002615,1.01e-24,3;CL:0002581,3.91e-19,1;CL:0000057,2.07e-11,76;CL:0000136,2.51e-11,15;CL:0002617,3.58e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3369!6.08e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3369;3.57e-19;1!DOID:1192;2.88e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.25e-19,1;DOID:1192,2.79e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.77e-23!6;UBERON:0002358!1.77e-23!6;UBERON:0003684!1.77e-23!6;UBERON:0001178!1.77e-23!6;UBERON:0001013!3.65e-13!14;UBERON:0000415!2.88e-12!4;UBERON:0007240!2.88e-12!4;UBERON:0005742!2.88e-12!4;UBERON:0005734!2.88e-12!4;UBERON:0004664!2.88e-12!4;UBERON:0004663!2.88e-12!4;UBERON:0005406!4.68e-12!2;UBERON:0004457!1.30e-11!12;UBERON:0000042!1.30e-11!12;UBERON:0000310!3.16e-09!10;UBERON:0001443!2.17e-08!11;UBERON:0000043!3.95e-08!3 | |ontology_enrichment_uberon=UBERON:0003688!1.77e-23!6;UBERON:0002358!1.77e-23!6;UBERON:0003684!1.77e-23!6;UBERON:0001178!1.77e-23!6;UBERON:0001013!3.65e-13!14;UBERON:0000415!2.88e-12!4;UBERON:0007240!2.88e-12!4;UBERON:0005742!2.88e-12!4;UBERON:0005734!2.88e-12!4;UBERON:0004664!2.88e-12!4;UBERON:0004663!2.88e-12!4;UBERON:0005406!4.68e-12!2;UBERON:0004457!1.30e-11!12;UBERON:0000042!1.30e-11!12;UBERON:0000310!3.16e-09!10;UBERON:0001443!2.17e-08!11;UBERON:0000043!3.95e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.54e-75;6!UBERON:0002358;9.54e-75;6!UBERON:0003684;9.54e-75;6!UBERON:0001178;9.54e-75;6!UBERON:0004457;5.63e-50;9!UBERON:0000042;5.63e-50;9!UBERON:0000310;3.16e-29;10!UBERON:0001443;1.29e-26;11!UBERON:0005406;2.85e-10;2!UBERON:0004458;4.79e-09;48!UBERON:0002323;1.74e-08;45!UBERON:0009569;3.23e-07;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.19e-75,6;UBERON:0002358,8.19e-75,6;UBERON:0003684,8.19e-75,6;UBERON:0001178,8.19e-75,6;UBERON:0004457,1.32e-37,12;UBERON:0000042,1.32e-37,12;UBERON:0000310,3.40e-29,10;UBERON:0001443,1.37e-26,11;UBERON:0009569,1.62e-12,112;UBERON:0005406,2.99e-10,2;UBERON:0002323,6.28e-10,46;UBERON:0004458,2.53e-09,49;UBERON:0003886,1.83e-08,54;UBERON:0002417,1.28e-07,60;UBERON:0000916,1.28e-07,60;UBERON:0002553,1.71e-07,61;UBERON:0004923,6.33e-07,66;UBERON:0002100,9.53e-07,199 | |||
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|short_description=p@chr4:112437251..112437278,+ | |short_description=p@chr4:112437251..112437278,+ | ||
}} | }} |
Latest revision as of 00:56, 30 July 2015
Short description: | p@chr4:112437251..112437278, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:112437251..112437278, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.69e-73 | 12 |
omentum preadipocyte | 5.01e-55 | 3 |
preadipocyte of the breast | 6.02e-55 | 3 |
adipocyte of omentum tissue | 1.01e-24 | 3 |
perirenal preadipocyte | 3.91e-19 | 1 |
fibroblast | 2.07e-11 | 76 |
fat cell | 2.51e-11 | 15 |
adipocyte of breast | 3.58e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.19e-75 | 6 |
peritoneum | 8.19e-75 | 6 |
abdominal cavity | 8.19e-75 | 6 |
visceral peritoneum | 8.19e-75 | 6 |
cavity lining | 1.32e-37 | 12 |
serous membrane | 1.32e-37 | 12 |
breast | 3.40e-29 | 10 |
chest | 1.37e-26 | 11 |
subdivision of trunk | 1.62e-12 | 112 |
perirenal fat | 2.99e-10 | 2 |
body cavity | 6.28e-10 | 46 |
body cavity or lining | 2.53e-09 | 49 |
body cavity precursor | 1.83e-08 | 54 |
abdominal segment of trunk | 1.28e-07 | 60 |
abdomen | 1.28e-07 | 60 |
anatomical cavity | 1.71e-07 | 61 |
organ component layer | 6.33e-07 | 66 |
trunk | 9.53e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.25e-19 | 1 |
peripheral nervous system neoplasm | 2.79e-07 | 3 |