FFCP PHASE1:Hg19::chr4:16888894..16888903,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:16888894..16888903,- | |||
|description=CAGE_peak_at_chr4:16888894..16888903,- | |||
|id=chr4:16888894..16888903,- | |||
|ontology_enrichment_celltype=CL:0002618!1.06e-08!3;CL:0002543!3.31e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002618;9.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,1.20e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;2.05e-29;1!UBERON:0002050;1.08e-23;5!UBERON:0005423;1.08e-23;5!UBERON:0000922;3.08e-13;49!UBERON:0001950;7.89e-13;20!UBERON:0002619;8.88e-12;22!UBERON:0000956;1.68e-10;25!UBERON:0000203;1.68e-10;25!UBERON:0002346;1.70e-08;4!UBERON:0000923;1.70e-08;4!UBERON:0010316;1.70e-08;4!UBERON:0005291;1.70e-08;4!UBERON:0002791;5.06e-08;32!UBERON:0003528;7.66e-08;34!UBERON:0002020;7.66e-08;34!UBERON:0001869;7.66e-08;32!UBERON:0001872;5.86e-07;5!UBERON:0002021;5.86e-07;5!UBERON:0002066;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.85e-13,20;UBERON:0002619,7.80e-12,22;UBERON:0000956,1.50e-10,25;UBERON:0000203,1.50e-10,25;UBERON:0002791,1.86e-08,32;UBERON:0001869,1.86e-08,32;UBERON:0003528,5.20e-08,34;UBERON:0002020,5.20e-08,34;UBERON:0001893,5.20e-08,34;UBERON:0001872,5.08e-07,5;UBERON:0002021,5.38e-07,5;UBERON:0002066,6.77e-07,5;UBERON:0002780,8.88e-07,41;UBERON:0001890,8.88e-07,41;UBERON:0003080,8.88e-07,41;UBERON:0006240,8.88e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.714397826272638,1.12264686313085,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,1.16641845353302,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.412618309791701,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.33946505990805,0.850299680406731,3.34626563499306,0,0,0,0,0,0,0,0,0,0.41023272848151,1.51243017733031,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,1.64092442705466,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.952257725854961,0,0,0,0,0.404234377916439,0.435433495793923,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p@chr4:16888894..16888903,- | |||
}} |
Latest revision as of 03:07, 30 July 2015
Short description: | p@chr4:16888894..16888903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:16888894..16888903, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 6.85e-13 | 20 |
regional part of cerebral cortex | 7.80e-12 | 22 |
cerebral cortex | 1.50e-10 | 25 |
pallium | 1.50e-10 | 25 |
regional part of telencephalon | 1.86e-08 | 32 |
cerebral hemisphere | 1.86e-08 | 32 |
brain grey matter | 5.20e-08 | 34 |
gray matter | 5.20e-08 | 34 |
telencephalon | 5.20e-08 | 34 |
parietal lobe | 5.08e-07 | 5 |
occipital lobe | 5.38e-07 | 5 |
umbilical vein | 6.77e-07 | 5 |
regional part of forebrain | 8.88e-07 | 41 |
forebrain | 8.88e-07 | 41 |
anterior neural tube | 8.88e-07 | 41 |
future forebrain | 8.88e-07 | 41 |