FFCP PHASE1:Hg19::chr4:16900320..16900332,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9079 | |EntrezGene=entrezgene:9079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6533 | |HGNC=HGNC:6533 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000510825_5end | |association_with_transcript=-19bp_to_ENST00000510825_5end | ||
|cluster_id=chr4:16900320..16900332,- | |||
|coexpression_cluster_id=C1083 | |coexpression_cluster_id=C1083 | ||
|description=CAGE_peak_8_at_LDB2_5end | |description=CAGE_peak_8_at_LDB2_5end |
Revision as of 03:08, 30 July 2015
Short description: | p8@LDB2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LDB2_5end |
Coexpression cluster: | C1083_lung_uterus_Endothelial_neuroectodermal_spleen_mesenchymal_occipital |
Association with transcript: | -19bp_to_ENST00000510825_5end |
EntrezGene: | 9079 |
HGNC: | 6533 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@LDB2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neocortex | 7.75e-17 | 20 |
regional part of cerebral cortex | 9.59e-17 | 22 |
cerebral hemisphere | 1.72e-14 | 32 |
cerebral cortex | 3.81e-14 | 25 |
pallium | 3.81e-14 | 25 |
telencephalon | 2.79e-13 | 34 |
regional part of telencephalon | 9.66e-13 | 32 |
brain grey matter | 1.16e-11 | 34 |
gray matter | 1.16e-11 | 34 |
regional part of forebrain | 5.87e-11 | 41 |
Showing 1 to 10 of 22 entries