FFCP PHASE1:Hg19::chr4:174449738..174449753,+: Difference between revisions
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|id=chr4:174449738..174449753,+
|short_description=p3@ENST00000515310
|description=CAGE_peak_3_at_ENST00000515310_5end
|association_with_transcript=0bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000515310_5end | |||
|cluster_id=chr4:174449738..174449753,+ | |||
|description=CAGE_peak_3_at_ENST00000515310_5end | |||
|id=chr4:174449738..174449753,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.59e-15!75;CL:0000055!4.71e-13!180;CL:0002494!2.11e-11!16;CL:0002537!1.07e-09!5;CL:0002620!2.67e-09!23;CL:1000306!1.25e-07!4;CL:0002547!1.25e-07!4;CL:0002334!3.23e-07!12;CL:0000048!3.68e-07!430;CL:0000723!3.96e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002537;5.01e-40;5!CL:1000306;2.18e-28;4!CL:0002547;2.18e-28;4!CL:0000349;8.78e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.20e-40,5;CL:1000306,2.18e-28,4;CL:0002547,2.18e-28,4;CL:0000349,7.83e-11,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.65e-12!27;UBERON:0005631!1.15e-10!14;UBERON:0000158!1.15e-10!14;UBERON:0000948!1.50e-10!24;UBERON:0005498!1.50e-10!24;UBERON:0004140!1.50e-10!24;UBERON:0009881!1.50e-10!24;UBERON:0004141!1.50e-10!24;UBERON:0003084!1.50e-10!24;UBERON:0007005!1.50e-10!24;UBERON:0004139!1.50e-10!24;UBERON:0004291!1.50e-10!24;UBERON:0004872!2.10e-10!84;UBERON:0004923!6.52e-10!57;UBERON:0000305!2.00e-09!7;UBERON:0004871!4.27e-08!8;UBERON:0000478!1.25e-07!24;UBERON:0000415!1.25e-07!4;UBERON:0007240!1.25e-07!4;UBERON:0005742!1.25e-07!4;UBERON:0005734!1.25e-07!4;UBERON:0004664!1.25e-07!4;UBERON:0004663!1.25e-07!4;UBERON:0003688!2.07e-07!6;UBERON:0002358!2.07e-07!6;UBERON:0003684!2.07e-07!6;UBERON:0001178!2.07e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.01e-28;7!UBERON:0004797;2.18e-28;4!UBERON:0000415;2.18e-28;4!UBERON:0007240;2.18e-28;4!UBERON:0005742;2.18e-28;4!UBERON:0005734;2.18e-28;4!UBERON:0004664;2.18e-28;4!UBERON:0004663;2.18e-28;4!UBERON:0005631;3.18e-20;10!UBERON:0000158;3.18e-20;10!UBERON:0000947;1.06e-09;21!UBERON:0010191;1.06e-09;21!UBERON:0000478;1.39e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,7.32e-29,7;UBERON:0000415,2.18e-28,4;UBERON:0007240,2.18e-28,4;UBERON:0005742,2.18e-28,4;UBERON:0005734,2.18e-28,4;UBERON:0004664,2.18e-28,4;UBERON:0004663,2.18e-28,4;UBERON:0004871,2.63e-25,8;UBERON:0004797,1.59e-16,7;UBERON:0005631,1.32e-14,14;UBERON:0000158,1.32e-14,14;UBERON:0004923,3.13e-11,66;UBERON:0000947,1.03e-09,21;UBERON:0010191,1.03e-09,21;UBERON:0000478,1.28e-08,24 | |||
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| ||
|short_description=p3@ENST00000515310 | |||
}} | }} |
Latest revision as of 03:25, 30 July 2015
Short description: | p3@ENST00000515310 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000515310_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000515310_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.20e-40 | 5 |
fibroblast of tunica adventitia of artery | 2.18e-28 | 4 |
fibroblast of the aortic adventitia | 2.18e-28 | 4 |
extraembryonic cell | 7.83e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
amnion | 7.32e-29 | 7 |
artery wall | 2.18e-28 | 4 |
tunica adventitia of artery | 2.18e-28 | 4 |
adventitia | 2.18e-28 | 4 |
tunica adventitia of blood vessel | 2.18e-28 | 4 |
aorta tunica adventitia | 2.18e-28 | 4 |
aorta wall | 2.18e-28 | 4 |
somatic layer of lateral plate mesoderm | 2.63e-25 | 8 |
blood vessel layer | 1.59e-16 | 7 |
extraembryonic membrane | 1.32e-14 | 14 |
membranous layer | 1.32e-14 | 14 |
organ component layer | 3.13e-11 | 66 |
aorta | 1.03e-09 | 21 |
aortic system | 1.03e-09 | 21 |
extraembryonic structure | 1.28e-08 | 24 |