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FFCP PHASE1:Hg19::chr4:19711103..19711108,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:19711103..19711108,+
|description=CAGE_peak_at_chr4:19711103..19711108,+
|description=CAGE_peak_at_chr4:19711103..19711108,+
|id=chr4:19711103..19711108,+
|id=chr4:19711103..19711108,+
|ontology_enrichment_celltype=CL:0002149!3.26e-07!6;CL:0002255!3.26e-07!6
|ontology_enrichment_celltype=CL:0002149!3.26e-07!6;CL:0002255!3.26e-07!6
|ontology_enrichment_celltype_v019=CL:0002149;1.34e-37;6!CL:0002255;1.34e-37;6!CL:0002253;7.30e-14;2!CL:0000499;1.20e-08;28!CL:0002563;1.40e-07;4
|ontology_enrichment_celltype_v019_2=CL:0002149,9.19e-38,6;CL:0002255,9.19e-38,6;CL:0002253,7.30e-14,2;CL:0002076,6.13e-10,42;CL:0000499,1.11e-08,28;CL:0002563,1.40e-07,4;CL:0000223,2.67e-07,58
|ontology_enrichment_development_v019=UBERON:0005795;6.42e-23;10
|ontology_enrichment_disease=DOID:305!1.26e-11!106;DOID:299!3.31e-11!25;DOID:0050687!1.76e-10!143;DOID:14566!4.27e-09!239;DOID:162!2.37e-08!235;DOID:3001!3.26e-07!6
|ontology_enrichment_disease_v019=DOID:3001;1.34e-37;6!DOID:299;2.48e-16;25!DOID:154;1.21e-13;2!DOID:4236;1.21e-13;2!DOID:120;6.06e-09;27!DOID:193;2.27e-08;29!DOID:5409;1.80e-07;4
|ontology_enrichment_disease_v019_2=DOID:3001,9.19e-38,6;DOID:299,2.20e-16,25;DOID:154,1.37e-13,2;DOID:4236,1.37e-13,2;DOID:305,1.83e-11,106;DOID:0050687,4.45e-11,143;DOID:120,5.58e-09,27;DOID:193,2.10e-08,29;DOID:5409,2.04e-07,4
|ontology_enrichment_uberon=UBERON:0000995!3.26e-07!21;UBERON:0005795!8.35e-07!22;UBERON:0003975!8.35e-07!22
|ontology_enrichment_uberon=UBERON:0000995!3.26e-07!21;UBERON:0005795!8.35e-07!22;UBERON:0003975!8.35e-07!22
|ontology_enrichment_uberon_v019=UBERON:0000995;8.35e-14;17!UBERON:0003975;4.45e-13;18!UBERON:0004175;2.61e-11;21!UBERON:0001052;1.40e-07;4!UBERON:0001242;1.40e-07;4!UBERON:0001262;1.40e-07;4!UBERON:0004786;1.40e-07;4!UBERON:0004808;1.40e-07;4!UBERON:0001277;1.40e-07;4!UBERON:0003134;2.49e-07;33!UBERON:0000474;4.28e-07;37
|ontology_enrichment_uberon_v019_2=UBERON:0000995,2.34e-11,21;UBERON:0005795,7.16e-11,22;UBERON:0003975,7.16e-11,22;UBERON:0004175,1.20e-09,25;UBERON:0001052,1.40e-07,4;UBERON:0001242,1.40e-07,4;UBERON:0001262,1.40e-07,4;UBERON:0004786,1.40e-07,4;UBERON:0004808,1.40e-07,4;UBERON:0001277,1.40e-07,4
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|short_description=p@chr4:19711103..19711108,+
|short_description=p@chr4:19711103..19711108,+
}}
}}

Latest revision as of 04:15, 30 July 2015

Short description:p@chr4:19711103..19711108, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr4:19711103..19711108, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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