FFCP PHASE1:Hg19::chr4:22746469..22746505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:22746469..22746505,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr4:22746469..22746505,- | |||
|id=chr4:22746469..22746505,- | |||
|ontology_enrichment_celltype=CL:0002087!3.65e-14!119;CL:0002031!2.08e-13!124;CL:0002057!1.18e-12!42;CL:0000860!1.15e-11!45;CL:0000738!2.34e-11!140;CL:0000988!7.20e-11!182;CL:0000945!9.02e-10!24;CL:0000826!9.02e-10!24;CL:0002194!4.33e-09!63;CL:0000576!4.33e-09!63;CL:0000040!4.33e-09!63;CL:0000559!4.33e-09!63;CL:0002032!5.91e-09!165;CL:0000837!5.91e-09!165;CL:0002009!9.62e-09!65;CL:0000080!1.94e-08!6;CL:0000037!2.07e-08!172;CL:0000566!2.07e-08!172;CL:0000839!5.80e-08!70;CL:0000557!8.06e-08!71;CL:0000766!3.66e-07!76;CL:0000946!8.81e-07!1;CL:0000786!8.81e-07!1;CL:0000980!8.81e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000946;6.47e-17;1!CL:0000786;6.47e-17;1!CL:0000945;1.04e-10;24!CL:0000860;1.38e-09;33!CL:0002057;1.38e-09;33!CL:0000473;9.32e-08;39!CL:0000234;9.32e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,7.57e-17,1;CL:0000786,7.57e-17,1;CL:0000980,7.57e-17,1;CL:0002087,2.93e-12,115;CL:0002031,1.03e-11,120;CL:0000945,1.04e-10,24;CL:0000826,1.04e-10,24;CL:0000738,3.13e-10,136;CL:0000988,2.33e-09,177;CL:0000785,4.34e-09,2;CL:0000955,4.34e-09,2;CL:0000818,4.34e-09,2;CL:0000954,4.34e-09,2;CL:0000816,4.34e-09,2;CL:0000860,5.59e-09,42;CL:0002057,5.59e-09,42;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,4.23e-08,168;CL:0000473,7.47e-08,48;CL:0000234,7.47e-08,48;CL:0000838,1.73e-07,52;CL:0000542,2.40e-07,53;CL:0000051,2.40e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.04e-16;1!CL:0000954;4.02e-09;2!CL:0002057;1.02e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.18e-10!32;UBERON:0001893!1.47e-09!34;UBERON:0002193!2.52e-09!112;UBERON:0000349!2.64e-09!5;UBERON:0002390!3.48e-09!102;UBERON:0003061!3.48e-09!102;UBERON:0002791!8.03e-08!33;UBERON:0002780!9.98e-08!41;UBERON:0001890!9.98e-08!41;UBERON:0006240!9.98e-08!41;UBERON:0002020!1.45e-07!34;UBERON:0003528!1.45e-07!34;UBERON:0003080!1.63e-07!42;UBERON:0007023!1.86e-07!115;UBERON:0002619!5.74e-07!22;UBERON:0001154!9.81e-07!1;UBERON:0001153!9.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.04e-16;1!UBERON:0001153;1.04e-16;1!UBERON:0009854;1.04e-16;1!UBERON:0002372;2.08e-16;1!UBERON:0001961;2.08e-16;1!UBERON:0001744;2.08e-16;1!UBERON:0001042;2.08e-16;1!UBERON:0001735;2.08e-16;1!UBERON:0006562;7.21e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.04e-16,1;UBERON:0001153,1.04e-16,1;UBERON:0001045,1.04e-16,1;UBERON:0002372,1.41e-16,1;UBERON:0001961,1.41e-16,1;UBERON:0001744,1.41e-16,1;UBERON:0001735,1.41e-16,1 | |||
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|short_description=p@chr4:22746469..22746505,- | |||
}} | }} |
Latest revision as of 04:25, 30 July 2015
Short description: | p@chr4:22746469..22746505, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:22746469..22746505, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 7.57e-17 | 1 |
plasma cell | 7.57e-17 | 1 |
plasmablast | 7.57e-17 | 1 |
nongranular leukocyte | 2.93e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.03e-11 | 120 |
lymphocyte of B lineage | 1.04e-10 | 24 |
pro-B cell | 1.04e-10 | 24 |
leukocyte | 3.13e-10 | 136 |
hematopoietic cell | 2.33e-09 | 177 |
mature B cell | 4.34e-09 | 2 |
pre-B-II cell | 4.34e-09 | 2 |
transitional stage B cell | 4.34e-09 | 2 |
small pre-B-II cell | 4.34e-09 | 2 |
immature B cell | 4.34e-09 | 2 |
classical monocyte | 5.59e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.59e-09 | 42 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 161 |
hematopoietic stem cell | 4.23e-08 | 168 |
defensive cell | 7.47e-08 | 48 |
phagocyte | 7.47e-08 | 48 |
lymphoid lineage restricted progenitor cell | 1.73e-07 | 52 |
lymphocyte | 2.40e-07 | 53 |
common lymphoid progenitor | 2.40e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.04e-16 | 1 |
caecum | 1.04e-16 | 1 |
midgut | 1.04e-16 | 1 |
tonsil | 1.41e-16 | 1 |
mucosa-associated lymphoid tissue | 1.41e-16 | 1 |
lymphoid tissue | 1.41e-16 | 1 |
tonsillar ring | 1.41e-16 | 1 |