FFCP PHASE1:Hg19::chr4:22787217..22787221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:22787217..22787221,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr4:22787217..22787221,+ | |description=CAGE_peak_at_chr4:22787217..22787221,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.91e-15;2!CL:0000182;1.72e-10;12 | |ontology_enrichment_celltype_v019=CL:0002535;1.91e-15;2!CL:0000182;1.72e-10;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.78e-15,2;CL:0000182,1.60e-10,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;5.86e-07;5 | |ontology_enrichment_disease_v019=DOID:4362;5.86e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0000160;2.95e-07;17!UBERON:0002107;5.75e-07;19!UBERON:0006925;5.75e-07;19!UBERON:0002108;5.86e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0000160;2.95e-07;17!UBERON:0002107;5.75e-07;19!UBERON:0006925;5.75e-07;19!UBERON:0002108;5.86e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0000160,2.86e-07,17;UBERON:0002108,5.08e-07,4;UBERON:0002107,5.50e-07,19;UBERON:0006925,5.50e-07,19;UBERON:0008836,5.50e-07,19 | |||
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| ||
|short_description=p@chr4:22787217..22787221,+ | |short_description=p@chr4:22787217..22787221,+ | ||
}} | }} |
Latest revision as of 04:25, 30 July 2015
Short description: | p@chr4:22787217..22787221, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:22787217..22787221, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.78e-15 | 2 |
hepatocyte | 1.60e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
intestine | 2.86e-07 | 17 |
small intestine | 5.08e-07 | 4 |
liver | 5.50e-07 | 19 |
digestive gland | 5.50e-07 | 19 |
liver bud | 5.50e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.70e-07 | 5 |