FFCP PHASE1:Hg19::chr4:77609742..77609764,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:77609742..77609764,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr4:77609742..77609764,+ | |description=CAGE_peak_at_chr4:77609742..77609764,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000313!3.20e-07!1 | |ontology_enrichment_celltype=CL:0000313!3.20e-07!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.66e-23;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.66e-23;3 | ||
|ontology_enrichment_disease=DOID:2152!3.20e-07!1 | |ontology_enrichment_disease=DOID:2152!3.20e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!7.85e-19!3;UBERON:0001049!1.17e-17!57;UBERON:0005068!1.17e-17!57;UBERON:0006241!1.17e-17!57;UBERON:0007135!1.17e-17!57;UBERON:0002680!5.04e-17!9;UBERON:0001895!5.04e-17!9;UBERON:0010092!5.04e-17!9;UBERON:0002616!5.64e-17!59;UBERON:0000200!2.04e-16!6;UBERON:0002020!1.92e-15!34;UBERON:0003528!1.92e-15!34;UBERON:0000955!6.54e-14!69;UBERON:0006238!6.54e-14!69;UBERON:0000956!1.06e-13!25;UBERON:0000203!1.06e-13!25;UBERON:0001869!2.42e-13!32;UBERON:0001950!2.76e-13!20;UBERON:0002148!5.20e-13!2;UBERON:0009662!5.20e-13!2;UBERON:0004733!1.01e-12!12;UBERON:0002028!1.01e-12!12;UBERON:0007277!1.01e-12!12;UBERON:0001893!1.69e-12!34;UBERON:0002619!4.67e-12!22;UBERON:0004732!1.00e-11!13;UBERON:0007023!1.12e-11!115;UBERON:0001017!2.51e-11!82;UBERON:0000073!4.77e-11!94;UBERON:0001016!4.77e-11!94;UBERON:0003075!7.67e-11!86;UBERON:0007284!7.67e-11!86;UBERON:0005743!1.10e-10!86;UBERON:0002346!3.04e-10!90;UBERON:0002791!3.32e-10!33;UBERON:0002780!3.56e-10!41;UBERON:0001890!3.56e-10!41;UBERON:0006240!3.56e-10!41;UBERON:0003076!3.93e-10!15;UBERON:0003057!3.93e-10!15;UBERON:0003080!6.63e-10!42;UBERON:0002771!2.64e-09!3;UBERON:0006331!5.74e-09!3;UBERON:0000033!7.46e-08!123;UBERON:0000989!9.71e-08!1;UBERON:0008811!9.71e-08!1;UBERON:0006258!9.71e-08!1;UBERON:0005876!9.71e-08!1;UBERON:0004874!9.71e-08!1;UBERON:0001871!1.65e-07!7;UBERON:0007190!2.21e-07!1;UBERON:0002298!2.25e-07!8;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0004911!3.20e-07!1;UBERON:0002581!4.61e-07!1;UBERON:0002022!4.90e-07!1 | |ontology_enrichment_uberon=UBERON:0000988!7.85e-19!3;UBERON:0001049!1.17e-17!57;UBERON:0005068!1.17e-17!57;UBERON:0006241!1.17e-17!57;UBERON:0007135!1.17e-17!57;UBERON:0002680!5.04e-17!9;UBERON:0001895!5.04e-17!9;UBERON:0010092!5.04e-17!9;UBERON:0002616!5.64e-17!59;UBERON:0000200!2.04e-16!6;UBERON:0002020!1.92e-15!34;UBERON:0003528!1.92e-15!34;UBERON:0000955!6.54e-14!69;UBERON:0006238!6.54e-14!69;UBERON:0000956!1.06e-13!25;UBERON:0000203!1.06e-13!25;UBERON:0001869!2.42e-13!32;UBERON:0001950!2.76e-13!20;UBERON:0002148!5.20e-13!2;UBERON:0009662!5.20e-13!2;UBERON:0004733!1.01e-12!12;UBERON:0002028!1.01e-12!12;UBERON:0007277!1.01e-12!12;UBERON:0001893!1.69e-12!34;UBERON:0002619!4.67e-12!22;UBERON:0004732!1.00e-11!13;UBERON:0007023!1.12e-11!115;UBERON:0001017!2.51e-11!82;UBERON:0000073!4.77e-11!94;UBERON:0001016!4.77e-11!94;UBERON:0003075!7.67e-11!86;UBERON:0007284!7.67e-11!86;UBERON:0005743!1.10e-10!86;UBERON:0002346!3.04e-10!90;UBERON:0002791!3.32e-10!33;UBERON:0002780!3.56e-10!41;UBERON:0001890!3.56e-10!41;UBERON:0006240!3.56e-10!41;UBERON:0003076!3.93e-10!15;UBERON:0003057!3.93e-10!15;UBERON:0003080!6.63e-10!42;UBERON:0002771!2.64e-09!3;UBERON:0006331!5.74e-09!3;UBERON:0000033!7.46e-08!123;UBERON:0000989!9.71e-08!1;UBERON:0008811!9.71e-08!1;UBERON:0006258!9.71e-08!1;UBERON:0005876!9.71e-08!1;UBERON:0004874!9.71e-08!1;UBERON:0001871!1.65e-07!7;UBERON:0007190!2.21e-07!1;UBERON:0002298!2.25e-07!8;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0004911!3.20e-07!1;UBERON:0002581!4.61e-07!1;UBERON:0002022!4.90e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.59e-12;6!UBERON:0002680;1.16e-08;9!UBERON:0001895;1.16e-08;9!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0002037;2.59e-12;6!UBERON:0002680;1.16e-08;9!UBERON:0001895;1.16e-08;9!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.45e-12,6;UBERON:0006215,2.45e-12,6;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9;UBERON:0004733,7.92e-07,12;UBERON:0002028,7.92e-07,12;UBERON:0007277,7.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80025734630388,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754773679776773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.487671699929078,0,0,0,0,0,1.39265542612958,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80025734630388,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754773679776773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.487671699929078,0,0,0,0,0,1.39265542612958,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr4:77609742..77609764,+ | |short_description=p@chr4:77609742..77609764,+ | ||
}} | }} |
Latest revision as of 07:00, 30 July 2015
Short description: | p@chr4:77609742..77609764, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77609742..77609764, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.45e-12 | 6 |
rhombic lip | 2.45e-12 | 6 |
regional part of metencephalon | 1.12e-08 | 9 |
metencephalon | 1.12e-08 | 9 |
future metencephalon | 1.12e-08 | 9 |
segmental subdivision of hindbrain | 7.92e-07 | 12 |
hindbrain | 7.92e-07 | 12 |
presumptive hindbrain | 7.92e-07 | 12 |