FFCP PHASE1:Hg19::chr4:85046693..85046696,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:85046693..85046696,- | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_at_chr4:85046693..85046696,- | |description=CAGE_peak_at_chr4:85046693..85046696,- | ||
|id=chr4:85046693..85046696,- | |id=chr4:85046693..85046696,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.43e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.35e-22!106;DOID:0050687!4.50e-18!143;DOID:1749!1.33e-14!14;DOID:162!2.32e-14!235;DOID:14566!8.88e-14!239;DOID:0050615!3.73e-08!16;DOID:0050686!4.98e-07!137 | |ontology_enrichment_disease=DOID:305!2.35e-22!106;DOID:0050687!4.50e-18!143;DOID:1749!1.33e-14!14;DOID:162!2.32e-14!235;DOID:14566!8.88e-14!239;DOID:0050615!3.73e-08!16;DOID:0050686!4.98e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:0050619;4.76e-13;1!DOID:1357;4.76e-13;1!DOID:3908;2.58e-10;5!DOID:3910;3.69e-07;2!DOID:4468;3.69e-07;2!DOID:0050615;3.80e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.23e-13,1;DOID:1357,4.23e-13,1;DOID:3908,4.32e-10,5;DOID:305,8.42e-08,106;DOID:4468,3.28e-07,2;DOID:0050615,4.71e-07,16;DOID:3910,5.28e-07,2;DOID:0050687,7.14e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.76e-13;1!UBERON:0001764;4.76e-13;1!UBERON:0001825;4.76e-13;1!UBERON:0004903;3.69e-07;2!UBERON:0002173;3.69e-07;2!UBERON:0002186;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.33e-13,1;UBERON:0001764,4.23e-13,1;UBERON:0001825,4.23e-13,1;UBERON:0004903,5.28e-07,2;UBERON:0002173,5.28e-07,2;UBERON:0002186,5.28e-07,2 | |||
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| ||
|short_description=p@chr4:85046693..85046696,- | |short_description=p@chr4:85046693..85046696,- | ||
}} | }} |
Latest revision as of 07:36, 30 July 2015
Short description: | p@chr4:85046693..85046696, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:85046693..85046696, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.33e-13 | 1 |
maxillary sinus | 4.23e-13 | 1 |
paranasal sinus | 4.23e-13 | 1 |
bronchoalveolar duct junction | 5.28e-07 | 2 |
alveolar duct | 5.28e-07 | 2 |
bronchiole | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.23e-13 | 1 |
maxillary sinus cancer | 4.23e-13 | 1 |
non-small cell lung carcinoma | 4.32e-10 | 5 |
carcinoma | 8.42e-08 | 106 |
clear cell adenocarcinoma | 3.28e-07 | 2 |
respiratory system cancer | 4.71e-07 | 16 |
lung adenocarcinoma | 5.28e-07 | 2 |
cell type cancer | 7.14e-07 | 143 |