FFCP PHASE1:Hg19::chr5:138727583..138727604,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:138727583..138727604,+ | |||
|description=CAGE_peak_at_chr5:138727583..138727604,+ | |description=CAGE_peak_at_chr5:138727583..138727604,+ | ||
|id=chr5:138727583..138727604,+ | |id=chr5:138727583..138727604,+ | ||
|ontology_enrichment_celltype=CL:0002368!6.87e-10!13;CL:0000066!1.38e-09!254;CL:0002077!5.74e-08!33;CL:0002076!2.77e-07!43 | |ontology_enrichment_celltype=CL:0002368!6.87e-10!13;CL:0000066!1.38e-09!254;CL:0002077!5.74e-08!33;CL:0002076!2.77e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002328;1.95e-10;3!CL:0000346;4.30e-10;3!CL:1000428;4.30e-10;3!CL:0002368;6.37e-09;13!CL:0002379;1.41e-08;1!CL:0002252;3.44e-08;1!CL:0000244;8.81e-08;4!CL:0000731;8.81e-08;4!CL:0002202;1.48e-07;9!CL:0002632;1.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.62e-10,3;CL:0000346,3.42e-10,3;CL:1000428,3.42e-10,3;CL:0002368,7.23e-09,13;CL:0002379,1.41e-08,1;CL:0002252,4.11e-08,1;CL:0000244,7.70e-08,4;CL:0000731,7.70e-08,4;CL:0002202,1.68e-07,9;CL:0002632,1.68e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!6.60e-08!10 | |ontology_enrichment_disease=DOID:0060058!6.60e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:3620;1.41e-08;1!DOID:3565;1.41e-08;1!DOID:630;3.44e-08;1!DOID:0050177;3.44e-08;1!DOID:6193;3.44e-08;1!DOID:0050427;3.44e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.41e-08,1;DOID:3565,1.41e-08,1;DOID:6193,3.57e-08,1;DOID:630,5.07e-08,1;DOID:0050177,5.07e-08,1;DOID:0050427,5.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.80e-11!169;UBERON:0000925!1.80e-11!169;UBERON:0006595!1.80e-11!169;UBERON:0001007!2.77e-08!155;UBERON:0001555!2.77e-08!155;UBERON:0007026!2.77e-08!155;UBERON:0000077!1.95e-07!130;UBERON:0002075!3.21e-07!18 | |ontology_enrichment_uberon=UBERON:0004119!1.80e-11!169;UBERON:0000925!1.80e-11!169;UBERON:0006595!1.80e-11!169;UBERON:0001007!2.77e-08!155;UBERON:0001555!2.77e-08!155;UBERON:0007026!2.77e-08!155;UBERON:0000077!1.95e-07!130;UBERON:0002075!3.21e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.61e-15;2!UBERON:0005058;4.61e-15;2!UBERON:0009113;4.61e-15;2!UBERON:0004815;1.95e-10;3!UBERON:0002031;1.95e-10;3!UBERON:0000412;4.30e-10;3!UBERON:0001992;4.30e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.62e-10,3;UBERON:0002031,1.62e-10,3;UBERON:0000412,3.42e-10,3;UBERON:0001992,3.42e-10,3;UBERON:0002370,4.12e-08,4;UBERON:0005058,4.12e-08,4;UBERON:0009113,4.12e-08,4;UBERON:0003295,4.12e-08,4;UBERON:0005562,4.12e-08,4 | |||
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| ||
|short_description=p@chr5:138727583..138727604,+ | |short_description=p@chr5:138727583..138727604,+ | ||
}} | }} |
Latest revision as of 10:22, 30 July 2015
Short description: | p@chr5:138727583..138727604, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:138727583..138727604, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.62e-10 | 3 |
hair follicle dermal papilla cell | 3.42e-10 | 3 |
stem cell of epidermis | 3.42e-10 | 3 |
respiratory epithelial cell | 7.23e-09 | 13 |
meningothelial cell | 1.41e-08 | 1 |
epithelial cell of esophagus | 4.11e-08 | 1 |
transitional epithelial cell | 7.70e-08 | 4 |
urothelial cell | 7.70e-08 | 4 |
epithelial cell of tracheobronchial tree | 1.68e-07 | 9 |
epithelial cell of lower respiratory tract | 1.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.62e-10 | 3 |
epithelium of bronchus | 1.62e-10 | 3 |
dermal papilla | 3.42e-10 | 3 |
papillary layer of dermis | 3.42e-10 | 3 |
thymus | 4.12e-08 | 4 |
hemolymphoid system gland | 4.12e-08 | 4 |
thymic region | 4.12e-08 | 4 |
pharyngeal gland | 4.12e-08 | 4 |
thymus primordium | 4.12e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.41e-08 | 1 |
meningioma | 1.41e-08 | 1 |
epithelioid sarcoma | 3.57e-08 | 1 |
genetic disease | 5.07e-08 | 1 |
monogenic disease | 5.07e-08 | 1 |
xeroderma pigmentosum | 5.07e-08 | 1 |