FFCP PHASE1:Hg19::chr5:147645292..147645302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:147645292..147645302,+ | |||
|coexpression_cluster_id=C296 | |||
|description=CAGE_peak_at_chr5:147645292..147645302,+ | |||
|id=chr5:147645292..147645302,+ | |||
|ontology_enrichment_celltype=CL:0002150!2.20e-42!3;CL:0000861!2.20e-42!3;CL:0000235!3.16e-13!10;CL:1000415!1.20e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;2.74e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.74e-50,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4362!2.00e-12!5;DOID:0050687!7.33e-11!143;DOID:305!5.44e-10!106;DOID:162!7.45e-09!235;DOID:14566!1.22e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000002!1.65e-10!6;UBERON:0001560!1.65e-10!6;UBERON:0001737!2.60e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;4.27e-34;3!UBERON:0002294;1.65e-15;7!UBERON:0001173;1.65e-15;7!UBERON:0002075;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,4.27e-34,3;UBERON:0006242,4.27e-34,3;UBERON:0002294,2.19e-12,9;UBERON:0001173,2.19e-12,9;UBERON:0004912,2.19e-12,9;UBERON:0002075,7.18e-07,18 | |||
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|short_description=p@chr5:147645292..147645302,+ | |||
}} | }} |
Latest revision as of 11:17, 30 July 2015
Short description: | p@chr5:147645292..147645302, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:147645292..147645302, + |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.74e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 4.27e-34 | 3 |
gall bladder primordium | 4.27e-34 | 3 |
biliary system | 2.19e-12 | 9 |
biliary tree | 2.19e-12 | 9 |
biliary bud | 2.19e-12 | 9 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.00e-08 | 14 |