FFCP PHASE1:Hg19::chr5:150950916..150950929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:150950916..150950929,- | |||
|description=CAGE_peak_at_chr5:150950916..150950929,- | |description=CAGE_peak_at_chr5:150950916..150950929,- | ||
|id=chr5:150950916..150950929,- | |id=chr5:150950916..150950929,- | ||
|ontology_enrichment_celltype=CL:0002076!1.07e-43!43;CL:0000223!4.25e-33!59;CL:0000066!2.80e-21!254;CL:0002251!4.93e-21!21;CL:0002368!3.96e-19!13;CL:0000076!4.62e-13!62;CL:0002621!7.62e-13!3;CL:0002159!6.44e-11!13;CL:0000244!1.33e-09!4;CL:0000731!1.33e-09!4;CL:0000220!4.34e-09!246;CL:0002321!5.86e-09!248;CL:0002202!1.92e-07!9;CL:0002632!1.92e-07!9 | |ontology_enrichment_celltype=CL:0002076!1.07e-43!43;CL:0000223!4.25e-33!59;CL:0000066!2.80e-21!254;CL:0002251!4.93e-21!21;CL:0002368!3.96e-19!13;CL:0000076!4.62e-13!62;CL:0002621!7.62e-13!3;CL:0002159!6.44e-11!13;CL:0000244!1.33e-09!4;CL:0000731!1.33e-09!4;CL:0000220!4.34e-09!246;CL:0002321!5.86e-09!248;CL:0002202!1.92e-07!9;CL:0002632!1.92e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.47e-12;42!CL:0002368;3.56e-11;13!CL:0002159;2.03e-10;14!CL:0000317;5.93e-09;2!CL:1000448;5.93e-09;2!CL:0002308;5.93e-09;2!CL:0002140;5.93e-09;2!CL:0000362;1.02e-07;9!CL:0002251;1.58e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.29e-13,42;CL:0002368,4.09e-11,13;CL:0002159,1.97e-10,14;CL:0000223,2.70e-09,58;CL:0000317,4.34e-09,2;CL:1000448,4.34e-09,2;CL:0002308,4.34e-09,2;CL:0002140,4.34e-09,2;CL:0000076,1.53e-08,63;CL:0000362,9.20e-08,9;CL:0002251,1.35e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.93e-09;2!UBERON:0010056;5.93e-09;2 | |||
|ontology_enrichment_disease=DOID:1749!2.65e-33!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.64e-18;14!DOID:3151;5.52e-17;1!DOID:3149;5.52e-17;1!DOID:3451;3.71e-09;2!DOID:4159;3.71e-09;2!DOID:0060122;3.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.32e-18,14;DOID:3151,5.53e-17,1;DOID:3149,5.53e-17,1;DOID:3451,3.71e-09,2;DOID:4159,3.71e-09,2;DOID:0060122,3.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.43e-20!5;UBERON:0003343!2.65e-17!4;UBERON:0004785!2.65e-17!4;UBERON:0000344!1.59e-15!12;UBERON:0000166!4.48e-14!21;UBERON:0000161!7.56e-14!35;UBERON:0000365!7.14e-13!5;UBERON:0001949!7.62e-13!3;UBERON:0000165!2.00e-12!28;UBERON:0000930!2.00e-12!28;UBERON:0001004!2.63e-12!72;UBERON:0004119!1.28e-11!169;UBERON:0000925!1.28e-11!169;UBERON:0006595!1.28e-11!169;UBERON:0005910!9.63e-11!6;UBERON:0003102!1.99e-09!95;UBERON:0001444!6.51e-08!48;UBERON:0000974!6.24e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.93e-16;4!UBERON:0004785;1.93e-16;4!UBERON:0000974;2.76e-11;6!UBERON:0003729;2.79e-11;13!UBERON:0002419;5.93e-09;2!UBERON:0007771;5.93e-09;2!UBERON:0003297;5.93e-09;2!UBERON:0001821;5.93e-09;2!UBERON:0003487;5.93e-09;2!UBERON:0001820;5.93e-09;2!UBERON:0000161;6.78e-08;19!UBERON:0000166;6.78e-08;19!UBERON:0000344;1.58e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.31e-16,4;UBERON:0004785,1.31e-16,4;UBERON:0003729,2.18e-11,13;UBERON:0002419,4.34e-09,2;UBERON:0007771,4.34e-09,2;UBERON:0003297,4.34e-09,2;UBERON:0001821,4.34e-09,2;UBERON:0003487,4.34e-09,2;UBERON:0001820,4.34e-09,2;UBERON:0005089,4.34e-09,2;UBERON:0005088,4.34e-09,2;UBERON:0000344,1.35e-07,20;UBERON:0001004,3.19e-07,74;UBERON:0000974,3.44e-07,10;UBERON:0003102,3.61e-07,99;UBERON:0000166,5.98e-07,22 | |||
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| ||
|short_description=p@chr5:150950916..150950929,- | |short_description=p@chr5:150950916..150950929,- | ||
}} | }} |
Latest revision as of 11:55, 30 July 2015
Short description: | p@chr5:150950916..150950929, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150950916..150950929, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.29e-13 | 42 |
respiratory epithelial cell | 4.09e-11 | 13 |
general ecto-epithelial cell | 1.97e-10 | 14 |
endodermal cell | 2.70e-09 | 58 |
sebum secreting cell | 4.34e-09 | 2 |
epithelial cell of sweat gland | 4.34e-09 | 2 |
epithelial cell of skin gland | 4.34e-09 | 2 |
acinar cell of sebaceous gland | 4.34e-09 | 2 |
squamous epithelial cell | 1.53e-08 | 63 |
epidermal cell | 9.20e-08 | 9 |
epithelial cell of alimentary canal | 1.35e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.31e-16 | 4 |
respiratory system mucosa | 1.31e-16 | 4 |
mouth mucosa | 2.18e-11 | 13 |
skin gland | 4.34e-09 | 2 |
epidermis gland | 4.34e-09 | 2 |
gland of integumental system | 4.34e-09 | 2 |
sebaceous gland | 4.34e-09 | 2 |
skin sebaceous gland | 4.34e-09 | 2 |
sweat gland | 4.34e-09 | 2 |
sweat gland placode | 4.34e-09 | 2 |
sebaceous gland placode | 4.34e-09 | 2 |
mucosa | 1.35e-07 | 20 |
respiratory system | 3.19e-07 | 74 |
neck | 3.44e-07 | 10 |
surface structure | 3.61e-07 | 99 |
oral opening | 5.98e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.32e-18 | 14 |
skin squamous cell carcinoma | 5.53e-17 | 1 |
keratoacanthoma | 5.53e-17 | 1 |
skin carcinoma | 3.71e-09 | 2 |
skin cancer | 3.71e-09 | 2 |
integumentary system cancer | 3.71e-09 | 2 |