FFCP PHASE1:Hg19::chr5:58572760..58572766,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:58572760..58572766,- | |||
|coexpression_cluster_id=C2338 | |coexpression_cluster_id=C2338 | ||
|description=CAGE_peak_at_chr5:58572760..58572766,- | |description=CAGE_peak_at_chr5:58572760..58572766,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!3.28e-22!3;CL:0000861!3.28e-22!3;CL:0000235!5.26e-07!10 | |ontology_enrichment_celltype=CL:0002150!3.28e-22!3;CL:0000861!3.28e-22!3;CL:0000235!5.26e-07!10 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.33e-14;29!UBERON:0001041;3.82e-08;30 | |ontology_enrichment_development_v019=UBERON:0008947;4.33e-14;29!UBERON:0001041;3.82e-08;30 | ||
|ontology_enrichment_disease=DOID:305!7.86e-14!106;DOID:0050687!1.92e-09!143 | |ontology_enrichment_disease=DOID:305!7.86e-14!106;DOID:0050687!1.92e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:4556;1.41e-09;3 | |ontology_enrichment_disease_v019=DOID:4556;1.41e-09;3 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,1.10e-09,3;DOID:305,1.55e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.80e-49!9;UBERON:0008947!1.43e-28!38;UBERON:0003258!1.43e-28!38;UBERON:0001557!1.39e-22!19;UBERON:0000065!8.59e-20!53;UBERON:0001004!6.39e-14!72;UBERON:0000072!1.35e-13!46;UBERON:0001041!2.62e-11!98;UBERON:0004921!3.73e-09!129;UBERON:0004185!3.73e-09!129;UBERON:0002171!1.52e-08!1;UBERON:0006518!1.52e-08!1;UBERON:0008949!1.52e-08!1;UBERON:0000101!1.52e-08!1;UBERON:0002167!1.52e-08!1;UBERON:0001007!2.75e-08!155;UBERON:0001555!2.75e-08!155;UBERON:0007026!2.75e-08!155;UBERON:0000077!7.18e-08!130;UBERON:0002048!1.00e-07!22;UBERON:0000117!1.00e-07!22;UBERON:0000171!1.00e-07!22;UBERON:0000170!1.00e-07!22;UBERON:0005597!1.00e-07!22;UBERON:0000118!1.00e-07!22;UBERON:0001048!1.78e-07!168;UBERON:0004119!2.36e-07!169;UBERON:0000925!2.36e-07!169;UBERON:0006595!2.36e-07!169;UBERON:0000063!9.05e-07!97 | |ontology_enrichment_uberon=UBERON:0001737!7.80e-49!9;UBERON:0008947!1.43e-28!38;UBERON:0003258!1.43e-28!38;UBERON:0001557!1.39e-22!19;UBERON:0000065!8.59e-20!53;UBERON:0001004!6.39e-14!72;UBERON:0000072!1.35e-13!46;UBERON:0001041!2.62e-11!98;UBERON:0004921!3.73e-09!129;UBERON:0004185!3.73e-09!129;UBERON:0002171!1.52e-08!1;UBERON:0006518!1.52e-08!1;UBERON:0008949!1.52e-08!1;UBERON:0000101!1.52e-08!1;UBERON:0002167!1.52e-08!1;UBERON:0001007!2.75e-08!155;UBERON:0001555!2.75e-08!155;UBERON:0007026!2.75e-08!155;UBERON:0000077!7.18e-08!130;UBERON:0002048!1.00e-07!22;UBERON:0000117!1.00e-07!22;UBERON:0000171!1.00e-07!22;UBERON:0000170!1.00e-07!22;UBERON:0005597!1.00e-07!22;UBERON:0000118!1.00e-07!22;UBERON:0001048!1.78e-07!168;UBERON:0004119!2.36e-07!169;UBERON:0000925!2.36e-07!169;UBERON:0006595!2.36e-07!169;UBERON:0000063!9.05e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.92e-26;1!UBERON:0006518;5.92e-26;1!UBERON:0008949;5.92e-26;1!UBERON:0000101;5.92e-26;1!UBERON:0002167;5.92e-26;1!UBERON:0001737;5.51e-12;9!UBERON:0001557;5.51e-12;9!UBERON:0000065;1.77e-10;44!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002171;5.92e-26;1!UBERON:0006518;5.92e-26;1!UBERON:0008949;5.92e-26;1!UBERON:0000101;5.92e-26;1!UBERON:0002167;5.92e-26;1!UBERON:0001737;5.51e-12;9!UBERON:0001557;5.51e-12;9!UBERON:0000065;1.77e-10;44!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,9.79e-26,1;UBERON:0006518,9.79e-26,1;UBERON:0008949,9.79e-26,1;UBERON:0000101,9.79e-26,1;UBERON:0002167,9.79e-26,1;UBERON:0001737,6.51e-12,9;UBERON:0008947,7.71e-11,38;UBERON:0003258,7.71e-11,38;UBERON:0000065,9.60e-08,54;UBERON:0001041,2.39e-07,87 | |||
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|short_description=p@chr5:58572760..58572766,- | |short_description=p@chr5:58572760..58572766,- | ||
}} | }} |
Latest revision as of 15:31, 30 July 2015
Short description: | p@chr5:58572760..58572766, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:58572760..58572766, - |
Coexpression cluster: | C2338_bile_large_hepatoma_epitheloid_immature_Hep2_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.79e-26 | 1 |
right lung lobe | 9.79e-26 | 1 |
lower lobe of lung | 9.79e-26 | 1 |
lobe of lung | 9.79e-26 | 1 |
right lung | 9.79e-26 | 1 |
larynx | 6.51e-12 | 9 |
respiratory primordium | 7.71e-11 | 38 |
endoderm of foregut | 7.71e-11 | 38 |
respiratory tract | 9.60e-08 | 54 |
foregut | 2.39e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.10e-09 | 3 |
carcinoma | 1.55e-08 | 106 |